Rhodoferax ferrireducens: Rfer_3208
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Entry
Rfer_3208 CDS
T00334
Name
(GenBank) sulfide dehydrogenase (flavoprotein) subunit SudB / sulfide dehydrogenase (flavoprotein) subunit SudA
KO
K00266
glutamate synthase (NADPH) small chain [EC:
1.4.1.13
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00250
Alanine, aspartate and glutamate metabolism
rfr00910
Nitrogen metabolism
rfr01100
Metabolic pathways
rfr01110
Biosynthesis of secondary metabolites
rfr01120
Microbial metabolism in diverse environments
rfr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Rfer_3208
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rfer_3208
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
Rfer_3208
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
DHODB_Fe-S_bind
Pyr_redox_3
Pyr_redox
NAD_binding_8
Thi4
FAD_oxidored
AlaDh_PNT_C
NAD_binding_1
HI0933_like
FAD_binding_3
NAD_binding_7
FAD_binding_2
DAO
Amino_oxidase
NAD_binding_6
Motif
Other DBs
NCBI-ProteinID:
ABD70917
UniProt:
Q21TI6
LinkDB
All DBs
Position
complement(3548554..3551397)
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AA seq
947 aa
AA seq
DB search
MSTESLSPASGDELGRYVSASRTLDATRSQIDALEQTEAVETFHRQLALLRRRLLSEPQA
FRDIFIADGTEAMVWEFQQDELGPDFIRTLWALMLRDDDTSKVLMRFVWNVPLKLKRKFV
RAIDTHLSERYPMFKGLSQNWPAENFIPPSMRDPLERSQDFGLVNQGYLGYMSQGYSARE
VEMFVWLEALRDKQCEDKPCELGLRVAGQAEPKGGCPVKIHIPEMLELLGTGRFREAMEL
IENCNPLPNVTGRVCPQELQCQGVCTHQKRPIEIGQIEWYLPQREKLVNAEGIAARFANI
PDPWAKADKPPVAVVGSGPAGLINAYLLASEGFPVTVFEAFHALGGVLRYGIPEFRLPND
LIDDVVGKIKLLGGKFVANFVVGKTATLEDLKQAGFWKIFVGTGAGLPRFMNVPGEHLLN
VMSANEFLTRVNLMQGLHADYETPLPETRGKRIMVIGGGNTAMDAARTARRLGGLVTIVY
RRTQAEMPVRVEELHHAFEEGIELKELRAPREFIGDDKTHFVTHSLLDVIALGAPDASGR
RSPVSTGETESMTVDLVIMALGNTPNPIIKDSEPSLKTTKWGTIDVAPGSQQTSLPGVYS
GGDAARGGSTAIRAAGDGQAAAREIVGDINLTAHEITAMVRNAAHYTEMGAAPQTILQKI
HLADGIVEFIVHSPLVAKAAQAGQFVRVLPWEKGELIPLTLADWDAKAGTICLVVQAMGA
SSIAINAMLVGDAFTGIAGPLGLPSELHRFEGQQTVVFTAGGLGLPPVYPIMRAHLRLGN
HVTLIAGFRNADLLFWVKAGERVSQLQAEFPDLLDVIYTSNDGSFCQKGFVTTPLEAMLK
DGQTSQGRKIAEVVTIGPPLMMRAVSDLTKPYGVKTVASLNSIMVDATGMCGACMVPVTI
DGKMVRKHACVDGPELDSHIIDWDKFLPRFNQFKPQEQASRVTHGFA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgagagcctgagcccagccagcggcgacgagctgggccgctacgtcagcgcg
agccgcacgctcgatgccacgcgctcgcagatcgacgccctggagcagaccgaagcggtg
gagaccttccatcgccagttggcgttgttgcgccggcgcctgctgagcgagccgcaggcc
tttcgcgacatctttattgctgacggcaccgaagccatggtctgggagtttcagcaagac
gagctggggcccgatttcatccgcaccctgtgggccttgatgctgcgtgacgacgacacc
agcaaagtgctgatgcgctttgtctggaacgtgccgctcaaactcaaacgcaagtttgtg
cgcgccatcgacacccatttgtcagagcgctacccgatgttcaagggcctgtcgcaaaac
tggccggcggaaaacttcatcccgccctctatgcgcgatccgctggagaggtcccaggac
ttcggcctggtcaaccagggttacctgggttacatgagccagggctacagcgcgcgcgag
gtggagatgtttgtgtggctggaagcgctgcgcgacaagcagtgcgaagacaagccgtgc
gagctgggtctgcgtgtcgcaggccaagccgagcccaagggcggctgtccggtcaagatc
catatcccggaaatgctcgaattgctcggcaccgggcgctttcgcgaagcgatggaattg
atagagaactgcaaccccttgcccaatgtgaccgggcgcgtctgcccgcaggagttgcag
tgccagggcgtctgcacgcaccagaagcggccgatcgagattggccagatcgagtggtat
ctgccgcaacgcgaaaagctggtcaatgccgagggcattgcggcgcgctttgccaatatt
cccgacccttgggccaaggccgacaagccgcccgtggcggtggtgggctcaggcccggcc
gggctgatcaacgcttacctgctggcctccgagggtttcccggtgacggtgttcgaggcc
tttcatgccctgggcggcgtgctgcgctacggcattcccgagttccgcctgcccaacgac
ctgatcgacgatgtggtcggcaaaatcaaattactcggcggcaagtttgtcgccaacttt
gtggtcggtaaaacagcgacgctggaggacctgaaacaagccggcttctggaagatattt
gtcggcaccggtgcgggtttgccgcgcttcatgaatgtgcccggtgagcacttgctcaac
gtcatgtcggccaacgagttcctgacgcgcgtgaacctgatgcagggtctgcacgcggac
tacgagactcccctgcccgagacacgcggcaaacgcatcatggtcattgggggcggcaac
acggcgatggatgccgcgcgcaccgcccgccgcctgggcgggctggtcaccatcgtctat
cgccgcacccaggccgagatgccggtgcgggtcgaggagttgcaccacgcgtttgaggaa
ggcattgagctcaaggaattacgggcgccgcgcgaattcatcggcgacgacaagacccat
tttgtgacccacagcctgctcgatgtgatcgcgctgggcgcgcccgatgcctccggccgg
cgcagtccggtgagcaccggcgagaccgaatcgatgacggtggacctggtcatcatggcg
ctgggcaacacacccaacccgatcatcaaagactccgagcccagcctcaagacgaccaag
tggggcaccatcgatgtggcgccgggttcgcagcagacctcgctgcccggcgtttattcg
ggtggcgatgcggcgcgtggcggctccacggccatccgcgccgccggcgacggccaggcc
gcggcgcgcgagattgtgggcgacatcaacctgacggcgcacgagatcactgccatggtc
aggaacgccgcgcactacaccgagatgggtgctgcgccgcagacgattctgcagaagatt
catttggccgatggcatcgtcgagttcatcgtgcattcgcccctggtcgccaaggcggcc
caggctggccaattcgtgcgcgtgttgccctgggaaaagggcgaactcattccgctcacg
ctggccgactgggatgccaaagccggcaccatttgcctggtggtgcaggccatgggcgcg
agcagcatcgccatcaacgccatgttggtgggcgatgcctttaccggtatcgccggcccg
ctgggcctgcccagtgaactgcaccgttttgagggccagcagacggtggtgtttaccgca
ggtggcctgggtttgccgcccgtttaccccatcatgcgcgcgcacctgcgcctgggcaac
cacgtcacgctgattgcgggcttccgcaatgccgacttgctgttctgggtcaaggcgggt
gaacgcgtgagccaactgcaagccgagttccccgatttgctcgacgtgatctacaccagc
aacgacggcagcttctgtcaaaagggttttgtcaccacgccgcttgaagccatgctcaag
gatggtcagaccagccagggccgcaaaattgccgaagtcgtgacgattggcccgccgctg
atgatgcgtgccgtgagcgatctgaccaaaccctatggcgtcaagacggttgccagcctg
aactcgatcatggtcgacgccaccggcatgtgcggcgcctgcatggtgccggtgacgatt
gacggcaagatggtgcgcaagcacgcctgtgttgacggccccgagctcgacagccacatc
atcgactgggacaagtttttgccgcgcttcaaccagttcaagccgcaggagcaggcgagc
cgggtcacgcacgggttcgcctga
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