Rosa chinensis (China rose): 112195111
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Entry
112195111 CDS
T06020
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112195111
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112195111
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112195111
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
112195111
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112195111
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112195111
Prokaryotic type
112195111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
112195111
NCBI-ProteinID:
XP_024191233
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All DBs
Position
3:40649150..40656571
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AA seq
417 aa
AA seq
DB search
MKHKQLLDLDSQENQNIGAMEIKENGEEEQQIVNPWKVEAKEGGKIDYDKLIDQFGCQRI
NQSLVKRVRRLTSRAPHVFLRRDIFFAHRDFNEILDAYERGEKFYLYTGRGPSSEALHLG
HLIPFMFTKYLQDAFKVPLVIQLTDDEKCMWKNLTVEESQRLARENAKDIIACGFDITRT
FIFSDFDYVGGAFYKNMVKVGKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFP
HLFSGQDNLRCLIPCAIDQDPYFRMTRDVAPRIGYHKPALIESLFFPALQGETGKMSASD
PNSAIYVTDSAKDIKSKINKFAFSGGQDTIEKHRELGADLEVDIPYKYLKFFLDDDIELA
YIGKEYGAGRMLTGEVKQRLIQVLTEIVERHRRARAAVTDEMVDAFMAVRPLPNMFD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacaaacaactcctggacctggactcacaagaaaatcaaaatataggagcaatg
gagataaaggaaaacggagaagaagagcagcagattgtgaatccatggaaggtggaggcc
aaagaaggcggcaaaatcgactatgataagctcatagatcagttcggttgccagaggatc
aatcaatctctcgtcaagcgtgtccgccgtctcacctcacgtgctccgcacgttttcctc
cgtcgcgacatcttcttcgctcaccgggacttcaatgagattctggatgcttatgagaga
ggagagaagttctatttgtacacaggaagagggccttcctcagaggctttgcatttgggg
catctcatccccttcatgttcaccaaatatttgcaagatgcctttaaggtccctctcgtt
atacaacttaccgacgatgagaaatgtatgtggaaaaatctcacagttgaagaaagccag
agacttgcaagggaaaatgctaaagacatcattgcttgtggttttgacataacaagaacc
tttatcttctctgattttgattatgttggtggtgccttctacaagaacatggtgaaggtc
ggaaagtgtgtcacctataataaggttgttggcatatttggtttcaccggtgaagatcat
ataggaaaagttagttttccacctgtacaggcggtaccatcatttccaagttcatttcca
catctcttctctggccaagataatcttcgttgtttaataccctgtgcaattgaccaggat
ccttattttagaatgacccgagatgttgctccacgcattggatatcacaagcctgcttta
attgagtctctattcttccctgcccttcagggagaaacaggaaaaatgtcggctagtgat
ccaaattctgccatctacgtaactgattctgcaaaggatattaagagcaagataaacaag
tttgcattttcagggggacaagatacaatagagaaacacagagagttgggagcagatctc
gaggtagacattccctataaatatctgaaattttttctggatgatgacatcgagcttgct
tatataggaaaggagtatggtgcaggtcgaatgttgacaggggaagtgaagcagaggctc
attcaagttttgacagaaattgtggagagacatcgtagggctagagctgctgtcactgat
gagatggtggacgcatttatggcagtgaggcccctcccaaacatgttcgactaa
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