Riemerella columbina: NYR17_07960
Help
Entry
NYR17_07960 CDS
T09247
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rcl
Riemerella columbina
Pathway
rcl00020
Citrate cycle (TCA cycle)
rcl00480
Glutathione metabolism
rcl00720
Other carbon fixation pathways
rcl01100
Metabolic pathways
rcl01110
Biosynthesis of secondary metabolites
rcl01120
Microbial metabolism in diverse environments
rcl01200
Carbon metabolism
rcl01210
2-Oxocarboxylic acid metabolism
rcl01230
Biosynthesis of amino acids
rcl04146
Peroxisome
Module
rcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rcl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR17_07960
09102 Energy metabolism
00720 Other carbon fixation pathways
NYR17_07960
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NYR17_07960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NYR17_07960
Enzymes [BR:
rcl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
NYR17_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
WKS94857
LinkDB
All DBs
Position
1688439..1690655
Genome browser
AA seq
738 aa
AA seq
DB search
MSTSKIYYTLTDEAPMLATHSFLPIIKAFTKTANIEIAVPDISLAGRILANMSDFLPENQ
RVADALAQLGELATKPEANIIKLPNISASIPQLNEAIAELQKQGFPIPDYPAEPKTEQEK
EIKARYTKVLGSAVNPVLREGNSDRRAPKAVKNYAKANPHRMGDWSAQSQTDVAHMNSGD
FYGTETSTTVEKDGQFKIVFFGNDGSEKVLKDLAPLQTGEIIDSSVMNLNSLKSFVKEAI
QEAKNRNILLSAHLKATMMKVSDPIIFGAIVETFFSDVFTKYAEVFKALDINPNNGLASL
FDKIKGTPQEAEIKADIDRALEENARVAMVNSDKGITNFHVPSDIIVDASMAALVRGGGK
MWNKEGKEEDTLAIIPDRSYAGFYQAVIDDMKAHGKLDPTTMGSVPNVGLMAKKAEEYGS
HDKTFQAEGDGVIKVLDENNQTLLKQKVEKGDIFRMCQTKDAPIQDWVKLAVNRSRLSDT
PAIFWLDQGRAHDREVIKKVKTYLQNHDTTGLDIQIMDVKDAMAATLKRAREGKDTISVS
GNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHIEQFIEEGYLRWD
SLGEFLALQASLEHLAQTQNNPKAQILSDALDEANAKFLATDKSPARKLGSIDNRGSHFY
LAMYWAEALANQTKDEALAAHFKPIAEAMHAQETQINEELIGAQGKPQDIGGYYHPNEAK
TYHAMRPSATLNQIIDQI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatctaaaatctactacacgctaacagatgaggcgccaatgctcgctacacac
tcatttttgcccatcataaaagcttttaccaaaactgccaatattgaaattgcagtgcct
gatatttctctcgcaggaagaattttagccaatatgtcggatttcctccctgaaaaccaa
agggtcgcagatgccctcgctcagttaggagaattggccaccaagccagaggcaaacatc
atcaagttgcctaacatttccgcttctattcctcaattaaacgaagcgattgccgagctc
caaaagcaaggtttcccaattcctgactaccctgctgagcctaaaacagagcaagaaaaa
gagatcaaagcccgctataccaaagttttgggtagcgccgtcaaccctgtgcttagagaa
gggaactcggacagacgcgctcccaaagccgttaaaaattacgccaaagccaacccacac
agaatgggcgactggtctgcacaaagccaaaccgatgtagcccatatgaacagtggcgat
ttctacggcaccgaaacttctaccactgtggaaaaagatggacagttcaaaatcgtgttc
tttggtaatgatggttctgaaaaggtactgaaagacttagcaccgctgcaaactggcgaa
atcatcgactcttctgtgatgaacctcaacagcttaaaatctttcgtaaaagaagccatc
caagaggctaaaaacagaaatatcctcctctcggctcacctaaaagccactatgatgaag
gtgtctgaccctattattttcggagccatcgtggagactttctttagcgatgtttttacg
aaatatgcagaggttttcaaagccttagacatcaaccctaacaacggtttagccagcctt
tttgataaaattaaaggcacaccgcaagaagcagaaatcaaagccgatatagaccgtgct
ttagaagaaaacgccagagttgctatggttaattctgataaaggcatcaccaatttccat
gtgccgagtgacatcatcgttgatgcttctatggctgccttggtaagaggtggtggcaaa
atgtggaacaaagagggcaaagaagaagacaccctcgccatcatccctgaccgctcctat
gctggcttctaccaagcggtgattgacgatatgaaagcccacggcaaattagaccctacc
actatgggcagcgtgcctaatgttgggcttatggcgaaaaaagcggaggaatacggctca
cacgacaaaaccttccaagcggagggcgatggcgtgatcaaagttcttgatgaaaataac
caaacgctattaaagcaaaaagtggaaaaaggcgatattttcagaatgtgccaaaccaaa
gatgccccaatccaagactgggtgaagttggcagttaaccgctccagactttcggatacg
ccagctattttctggttagaccaaggcagagcccacgatagagaggtcattaaaaaggta
aaaacttacctccaaaaccacgataccacaggcttagacatccaaattatggatgtgaaa
gatgccatggcagctaccctaaaaagagctagagaaggcaaagacaccatttctgtgtct
ggcaatgtactcagagactaccttaccgatttattccctattttagaattaggcacttca
gcgaagatgctctccattgtcccactgatgaacggcggcggcttgtttgaaactggcgct
ggcggctctgcaccgaagcacattgagcaatttatagaagaaggctatctgcgttgggat
tctttaggcgagtttttggcgctacaagccagcttagagcacttggcacaaacacaaaac
aaccctaaagcacagattctatccgatgctttagatgaagccaatgcgaaattccttgcc
acagacaaatctccagcgagaaagttgggcagcatagacaaccgtggttctcacttctac
cttgcgatgtattgggctgaagccttagccaaccaaaccaaagatgaagccttagcggca
cacttcaaacctattgccgaagcgatgcacgcccaagaaacccaaatcaacgaggagctg
attggcgcacagggtaaacctcaggatatcggtggctattaccaccctaacgaggcgaaa
acctaccacgcaatgcgaccttccgccactttaaaccagattatcgaccagatataa
DBGET
integrated database retrieval system
