KEGG   Panicum virgatum (switchgrass): 120656355
Entry
120656355         CDS       T07260                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00900  Terpenoid backbone biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Module
pvir_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    120656355
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     120656355
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     120656355
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 120656355
NCBI-ProteinID: XP_039790356
LinkDB
Position
1N:complement(49249589..49255455)
AA seq 746 aa
MATGVAPAPLPHVRVRDGGIGFTRSVDFAKVLSVPGVGTMRTGYSRGRALVVKSSSTGSD
TMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMATSDTKD
VAKTVEEVMRIADKGADLVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPAVAL
RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKEIEHIEKVFSPLVEKCKKYGRAMRI
GTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVVMVQAYRLL
VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP
CRRLANLGTHAANLQIGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL
MSVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI
SMGVLTPLSEQLTKPLPHAIALVNLDELSSGAHKLLPQGTRLAVTLRGDESDEQLDILKG
VDDITMLLHSVPYGEEKTGRVHAARRLFEYLQNNGLNFPVIHHIEFPKTIGRDDLVIGAG
ANVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDL
QEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVQRGI
AMEGATDALIQLIKDHGRWVDPPAEE
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggccaccggcgtggcaccagctcctctcccacacgtccgggtgcgcgatggcggcatc
gggttcaccaggagcgtggactttgctaaggtcttatctgttcccggtgttggcacgatg
aggacaggctactcgaggggcagggcgctcgtggtgaagagctcgagtactggttcagat
accatggagcttgagccatcatctgaaggaagcccacttttagtccccaggcaaaagtac
tgtgaatctacacatcagacaaggagaaggaaaactcgtactgtaatggtggggaatgtc
ccactcggtagtgatcatcccataaggattcagaccatggcgacttcagataccaaggat
gttgccaaaactgtagaagaggtgatgagaatagcagataaaggagccgatcttgttaga
ataaccgtccagggtaagaaggaagctgatgcctgctttgagatcaagaacaccctggtt
cagaagaattacaacattccactagtggccgatattcattttgctcctgcagtagcttta
agagtggcagaatgctttgacaaaattcgtgtgaaccctggaaattttgctgatcgccgt
gctcaatttgagcagctggaatatacagacgacgagtaccaaaaagagatcgagcatatt
gagaaggtattttctccattagttgagaaatgcaagaagtatgggagagcaatgcgcata
ggaacaaatcatggaagtctctctgaccgcataatgagttactatggtgattctccacga
ggaatggttgagtctgctttggaatttgctaggatatgtcggaagttggacttccacaac
tttgtattttcaatgaaagctagtaaccctgttgtcatggtccaagcatatcgcctgctt
gttgcagaaatgtataacctaggatgggattatccattgcacttgggtgttacagaagcc
ggagagggtgaagatggaaggatgaagtctgctattggcattggaacacttctaatggat
ggcctgggtgacacaatccgtgtctcccttacggaaccaccagaagaagagatcgatcct
tgccggagattggcaaatcttgggacacatgctgcaaatcttcaaatcggggtggcacca
tttgaagagaagcacaggcactattttgacttccagcgtaggagtggtcagttacctttg
cagaaggagggtgaggaagttgactacagaaatgtactgcatcgtgatggctctgtactg
atgtcagtttcactggaccagttgaaggctcctgagctcctttatagatcccttgcagcg
aagcttgtggttggcatgcctttcaaggaccttgctactgtagattccattcttttgagg
gagctcccccctgtagaagatgctgaagctaggcttgcactcaaaagattagttgacatc
agcatgggagtgttgacccccttatcagagcagttgacaaaaccactcccacatgcaatt
gcgcttgtcaaccttgacgaactatcaagtggggctcacaaacttttgccacaaggtact
agacttgctgtcacccttcgtggagatgaatcagacgagcagctagatatccttaagggt
gttgatgatataacaatgctgctacatagcgttccatatggtgaggagaagactggcaga
gtacatgctgctaggaggttattcgagtacttacagaacaatggcttgaactttcctgta
atccatcacatagagttccctaaaaccattggcagagatgatcttgtcattggtgctggg
gcgaatgttggtgctctcctagtcgatggtcttggtgatggtgtacttcttgaagctgct
gaccaggaatttgagtttctgagggacacatctttcaatttgcttcagggttgcagaatg
cgcaacacaaaaactgaatacgtgtcttgtccttcatgtgggcgaacacttttcgatctc
caggaaattagtgctgagattagggaaaagacctctcatctgccaggcgtctcgatcgcg
atcatgggttgcattgtcaacgggccaggagagatggccgatgccgatttcggatacgtt
ggaggcgctcctggaaagatcgatctttacgttggcaagaccgttgtgcagcgcggcatc
gccatggaaggtgccaccgacgccctgatccagctgatcaaggaccacggccgatgggtg
gaccctcccgccgaggagtaa

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