Candidatus Pelagibacter ubique: SAR11_1277
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Entry
SAR11_1277 CDS
T00257
Symbol
racX
Name
(GenBank) Aspartate racemase
KO
K01779
aspartate racemase [EC:
5.1.1.13
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00250
Alanine, aspartate and glutamate metabolism
pub00470
D-Amino acid metabolism
pub01054
Nonribosomal peptide structures
pub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAR11_1277 (racX)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAR11_1277 (racX)
09109 Metabolism of terpenoids and polyketides
01054 Nonribosomal peptide structures
SAR11_1277 (racX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pub01008
]
SAR11_1277 (racX)
Enzymes [BR:
pub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.13 aspartate racemase
SAR11_1277 (racX)
Polyketide biosynthesis proteins [BR:
pub01008
]
Nonribosomal peptide tailoring proteins
Others
SAR11_1277 (racX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Glu_race
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
AAZ22081
UniProt:
Q4FL57
LinkDB
All DBs
Position
1211265..1212011
Genome browser
AA seq
248 aa
AA seq
DB search
MIGILGGMGTQAGLDFCNKLAMLNRGKSDQEYPLFMLYNKSNIPGRPESIGVQTKSLSTI
PRNSKNTKKYNRVLKSLLDGCKSLEKSGCKFIVIPCNTAHYWYEDLRKKIKIPIINMPKE
VFIQTKKSCKKNSKIGLLATEGTLKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKM
GNIKLAEKTIKPAIKYLIKQKCKKIILGCTEIPIAIFAYKSLQNAKVSKLYLDPNLILAN
SCMAKYKK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgattggaattttaggcggaatgggaactcaagcgggacttgatttttgcaataaactc
gcaatgttaaatagaggaaaaagtgatcaagaataccctttattcatgctttataacaaa
tcaaatattcctggaagaccagaatctattggtgttcaaactaaatcattatctacaatt
ccaagaaactcaaaaaatacaaaaaaatataatagagttttaaaaagtttgttagatgga
tgtaaatcattagaaaaaagtgggtgcaaatttattgttataccctgtaacactgcacac
tattggtatgaagatttaaggaaaaaaatcaagataccgatcattaacatgcctaaagaa
gtttttatacaaacaaaaaaaagttgtaaaaaaaattctaaaattggacttcttgcaaca
gagggaactttaaaaactgagatttatgataaaatttttaaaaaggattatgtattgatt
aaacctttaagtaatttacaaacaagttcagtaaacaaaacaatcaaacatgtaaaaatg
ggcaatataaaactagcagaaaaaactattaagcctgcaattaaatatttaatcaaacaa
aaatgtaaaaaaataatacttggctgcactgagatacctattgcaatttttgcatataaa
tctttacaaaatgctaaagtttcaaaattgtaccttgatcctaatttaatattagccaac
tcctgtatggcaaaatataaaaaatag
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