Paraoerskovia sediminicola: GCM125_32260
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Entry
GCM125_32260 CDS
T09128
Symbol
gcpE
Name
(GenBank) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00900
Terpenoid backbone biosynthesis
psek01100
Metabolic pathways
psek01110
Biosynthesis of secondary metabolites
Module
psek_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM125_32260 (gcpE)
Enzymes [BR:
psek01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
GCM125_32260 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
GCM125_32260 (gcpE)
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Motif
Pfam:
GcpE
DHquinase_I
zf-RING_7
LysW-like_globular
Motif
Other DBs
NCBI-ProteinID:
BDZ43927
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Position
complement(3364102..3365241)
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AA seq
379 aa
AA seq
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MPDAPPPVLAPRRRTRKIRVGSVDVGGDAPVSVQSMTTTPTSDINATLQQIAELTAAGCD
IVRVAVPTQDDADALPAIATKSQIPVIADIHFQPKYVFAAIDAGCAAVRVNPGNIRKFDD
QVKEIARAASDAGTSLRIGVNAGSLDRRLLEKYGKATPEALVESAVWEASLFEEHDFHDF
KISVKHNDPVVMVRAYELLSQAGDWPLHLGVTEAGPAFQGTIKSATAFGALLSQGIGDTI
RVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLAEKVTAGLEGMEV
PLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVVKTVPEAMIVETLIEEAMRIA
DTMEPEEGASTGSPTVSVG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcacccccgcccgtgctcgctccccgacgcaggacgcgcaagatccgcgtc
ggctcggtcgacgtcggcggcgacgcccccgtgagcgtccagtcgatgacgacgaccccc
acgagcgacatcaacgcgacgctccagcagatcgcggagctgacggcggccgggtgcgac
atcgtgcgggtcgcggtcccgacgcaggacgacgccgacgcgctgccggcgatcgcgacc
aagtcacagatcccggtgatcgccgacatccacttccagccgaagtacgtgttcgccgcc
atcgacgccgggtgcgcggcggtccgggtcaacccgggcaacatccgcaagttcgacgac
caggtgaaggagatcgcccgcgcggcgtccgacgccgggacctcgctccgtatcggcgtc
aacgccgggtccctcgaccgtcgactcctcgagaagtacgggaaggcgacccccgaggca
ctcgtggagtcggccgtgtgggaggcctccctcttcgaggagcacgacttccacgacttc
aagatctcggtcaagcacaacgacccggtcgtgatggtgcgcgcctacgagctgctctcc
caggccggggactggccgctgcacctcggcgtcaccgaggcggggccggcgttccagggc
acgatcaagtcggccacggcgttcggcgcgctcctgagccaggggatcggcgacacgatc
cgggtgtccctctccgcgccgccggtcgaggaggtcaaggtcggcatccagatcctccag
tccctcaacctgcgcccccgcaagctcgagatcgtgtcgtgcccgtcctgcgggcgcgcg
caggtcgacgtctacacgctcgccgagaaggtcacggccggcctcgagggcatggaggtc
ccgctgcgggtcgccgtcatgggctgcgtcgtcaacggcccgggcgaggcgcgcgaggcc
gacctcggtgtggcctccgggaacggcaaggggcagatcttcgtcaagggtgaggtcgtc
aagacggtccccgaggcgatgatcgtcgagaccctcatcgaggaggcgatgcgcatcgcc
gacaccatggagccggaggagggcgcgtcgacgggctcgccgacggtcagtgtcggatga
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