Paenibacillus polymyxa M1: PPM_4129
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Entry
PPM_4129 CDS
T01968
Symbol
trpS
Name
(GenBank) tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPM_4129 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppo01007
]
PPM_4129 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_4129 (trpS)
Enzymes [BR:
ppo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
PPM_4129 (trpS)
Amino acid related enzymes [BR:
ppo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PPM_4129 (trpS)
Transfer RNA biogenesis [BR:
ppo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPM_4129 (trpS)
Prokaryotic type
PPM_4129 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
CCI70938
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All DBs
Position
complement(4761008..4761997)
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AA seq
329 aa
AA seq
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MKIVLSGIQPSGQLTLGNYIGAMKNFVKLQEDHQCYFMVPDLHAITVPQEPAQLREQSEA
VAALFIAAGINPEKSNVFLQSHVPQHAELGWLMTTLTNMGELERMTQFKDKSAGKDSVGA
GLFVYPSLMAADILLYNADLVPVGDDQKQHLELTRDLAGRFNHRYGDYFTVPEPYIPEVG
ARIMSLDDASKKMSKSNPNAGSFIALLDDPKVIRKKISRATTDSGSEVKYDPANKPEISN
LMSIYSQCSGLSLQEVQDRYEGQMYGTFKKELAETVVAMLEPIQQRYRDIRESGEIGHIL
AQSAERAQEAAEVTLSAVKERMGFLPRVR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtactttcaggtattcagcctagtggacaacttactttgggtaattacatc
ggcgcaatgaaaaactttgttaaattgcaagaggatcaccaatgttactttatggttcca
gatcttcatgcgattaccgtaccgcaggaaccagctcaattacgcgagcagtcggaggcg
gtggcggcattatttatcgcagcgggtattaacccagagaaatccaacgtctttttacaa
tcccatgttcctcagcacgctgagctgggatggttgatgacgacactgacgaatatgggc
gagctcgaacgtatgactcagtttaaggacaagtctgctggcaaggattccgtaggagca
gggctgttcgtatatccgtcgttaatggcagccgacattttgctctacaatgcggatctt
gtcccagtaggtgatgaccagaaacagcatctggagctgacacgggatttggcgggccgc
tttaatcaccgttatggagattattttactgttcccgagccgtatattcctgaagtaggg
gcgagaattatgtccctggatgatgcatccaaaaaaatgagcaagagtaatccgaatgca
ggcagttttattgcgctgctggacgatccgaaagttatacgcaaaaaaatcagccgcgcc
actaccgattcgggcagtgaagttaaatatgatccggccaataaaccggaaattagtaat
ctaatgagcatttacagccagtgttccggtttgtcgctccaagaagtgcaggatcgttat
gaaggccaaatgtacgggacatttaaaaaagaactggcagagacggttgtagctatgctt
gaaccgattcagcagcgctatcgcgatatccgggaatccggtgaaattggacatattttg
gcccaatccgcagagcgtgctcaagaagctgctgaagtcacgctgtctgcggttaaagag
cgtatgggctttttgccacgtgtacgctag
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