Pseudoalteromonas phenolica: PP2015_220
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Entry
PP2015_220 CDS
T04165
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pphe
Pseudoalteromonas phenolica
Pathway
pphe03030
DNA replication
pphe03430
Mismatch repair
pphe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP2015_220
03430 Mismatch repair
PP2015_220
03440 Homologous recombination
PP2015_220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphe03032
]
PP2015_220
03400 DNA repair and recombination proteins [BR:
pphe03400
]
PP2015_220
03029 Mitochondrial biogenesis [BR:
pphe03029
]
PP2015_220
DNA replication proteins [BR:
pphe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PP2015_220
DNA repair and recombination proteins [BR:
pphe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PP2015_220
TLS (translesion DNA synthesis) factors
Other SOS response factors
PP2015_220
Mitochondrial biogenesis [BR:
pphe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PP2015_220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALO40747
UniProt:
A0A0S2JXG7
LinkDB
All DBs
Position
I:254151..254813
Genome browser
AA seq
220 aa
AA seq
DB search
MARGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQMQERTEWHRVVLF
GKLAEVAGEYLRKGSQVYIEGRLQTRKWTDQSGQEKYTTEIVVDMGGQMQMLGGRGEQQG
GGQYQGQQSGGFNNQQSQYNQAPQQQQASQQQGGFAPQQPAQQQGGFAPQQQQSQQGGFA
PQQQSGQQQGGFAPKPQSAPQGGASNPMEPPIDFDDDIPF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggtgtaaacaaagtaattttggttggtaacttaggccaagacccagaagtt
cgttacatgccaaatggtaacggcgtagcaaatattagcattgctacaacagatagctgg
aaagataaaaacacagggcaaatgcaagagcgtactgagtggcaccgtgttgtgttattc
ggtaaattagctgaagttgcaggtgaatacttacgtaaaggctcacaagtttatatcgaa
ggccgtttacagacacgtaaatggacagatcaaagcggtcaagaaaagtatacaactgaa
attgttgtagacatgggcggtcaaatgcaaatgctaggtggtcgtggcgagcagcaaggc
ggtggccagtatcaaggtcagcagtctggtggttttaataatcaacagtctcagtacaac
caagcgccacagcaacagcaggcttcacaacagcaaggtggttttgcgccgcagcaacct
gcacaacaacaaggcggttttgcaccgcaacagcagcagtctcagcagggcggttttgca
cctcagcagcagtctggtcagcagcaaggtggatttgcacctaaacctcaatcagcgcca
caaggcggtgcttcaaacccgatggaaccaccaatcgattttgatgatgatattccgttt
taa
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