Populus trichocarpa (black cottonwood): 7478581
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Entry
7478581 CDS
T01077
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7478581
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7478581
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7478581
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
7478581
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class I (G)
7478581
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
7478581
Prokaryotic type
7478581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
7478581
NCBI-ProteinID:
XP_002312840
UniProt:
A9PAK1
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All DBs
Position
9:complement(12354057..12358767)
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AA seq
404 aa
AA seq
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MEEEKRETQNQLAEEEDQIVNPWEVAAKDGGKIDYDKLIDKFGCQRLDQTLIDRVHRLTG
RPPHVFLRRGVFFAHRDFNEILDAYEKGKKFYLYTGRGPSSEALHLGHLVPFMFTKYLQD
VFRVPLVIQLTDDEKCMWKNLTVEESQRLARENAKDIIACGFDITRTFIFSDFDYVGGAF
YKNMVKVAKCVTLNKVQGIFGFSGEDHIGKISFPPVQAVPSFPSSFPHLFSGKDDLRCLI
PCAIDQDPYFRMTRDAAPRIGYHKPSLIESTFFPALQGETGKMSASDPNSAIYVTDSAKV
IKSKINKYAFSGGQDSVEKHRQLGANLEVDISVKYLNFFLEDDAELEHIKKEYAAGRMLT
GEVKGRLGSVLSEIVERHRAARASVTDEVVDAFMAARPLPNMFD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagagagagactcaaaaccaactagcagaagaagaggaccaaatagtc
aacccatgggaagtcgccgccaaagacggcggcaagattgattatgacaaacttatcgac
aaattcggctgtcaaagactcgaccaaacactaattgaccgtgtccaccgcctcaccggt
cgccctccccacgtcttcctccgccgtggcgtcttcttcgcccaccgtgacttcaacgaa
atcctcgacgcctatgaaaagggtaaaaaattctacctttacaccggccgtggtccttcc
tctgaagcattgcatctagggcatctcgttccgtttatgttcactaagtatttgcaagat
gtgtttagggttccgcttgtgatacagttgactgatgatgagaaatgtatgtggaagaat
ttaaccgtggaggaaagtcagaggcttgcacgtgagaatgctaaggatattattgcttgt
gggtttgatatcacgcggacttttattttctcggatttcgattatgttggtggtgcattc
tacaagaacatggtgaaggttgcaaagtgtgtcacattgaataaggtccagggtattttt
ggtttctcgggtgaagatcatattgggaaaatcagttttccgcccgtgcaggcagttcca
tcatttcccagttcattcccacaccttttctcgggaaaagacgacctccgttgcctaata
ccttgtgcaattgatcaggatccatatttcagaatgacgcgggatgctgctcctcggata
ggatatcacaaaccttcattgattgagtcaacattcttccctgcgctgcagggggagaca
ggaaaaatgtctgctagtgatccaaattctgccatctatgtgactgattcagctaaagtc
attaagagtaagatcaacaagtatgcgttctctggtgggcaagattctgtagagaaacac
agacaacttggagcaaatcttgaggtagatatttcagtcaaatacctgaactttttcctt
gaggatgatgctgagcttgaacacattaagaaggagtatgctgcaggacgtatgctaaca
ggagaagtgaagggccgccttggctcggttttgtctgagatagtagaaagacatcgtgca
gctcgagcgagtgtgactgatgaagttgtggatgcttttatggctgcacggccccttccc
aatatgtttgactga
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