Candidatus Protochlamydia naegleriophila: PNK_2118
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Entry
PNK_2118 CDS
T04212
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl00020
Citrate cycle (TCA cycle)
pnl00480
Glutathione metabolism
pnl00720
Other carbon fixation pathways
pnl01100
Metabolic pathways
pnl01110
Biosynthesis of secondary metabolites
pnl01120
Microbial metabolism in diverse environments
pnl01200
Carbon metabolism
pnl01210
2-Oxocarboxylic acid metabolism
pnl01230
Biosynthesis of amino acids
pnl04146
Peroxisome
Module
pnl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pnl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PNK_2118 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
PNK_2118 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PNK_2118 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PNK_2118 (icd)
Enzymes [BR:
pnl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PNK_2118 (icd)
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Isocitrate_DH_C_bact
Motif
Other DBs
NCBI-ProteinID:
CUI17721
UniProt:
A0A0U5JCI8
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All DBs
Position
cPNK:2483292..2484740
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AA seq
482 aa
AA seq
DB search
MATQTIPITVAEGDGIGPEIMEATLRILKASGAPLEIQKVEIGEKVYLRGQPTGIDPATW
DLIRQSKAFLKAPITTPQGGGFKSLNVTVRTTLGLYANVRPCVAYSPFVETKHPGMNVVI
VRENEEDLYTGIEYQQTPDVYEALKLITRPGCEKIIRYAFEYAQTYQRKKVTCFTKDNIL
KLTDGLFHKVFEEIGAEYPNIEKEHWIVDIGAAKLADTPAAFDVVVMPNLYGDILSDVAA
QIAGSVGLAGSANIGTSGAMFEAIHGSAPRRAGQNLANPSGLLLAAVQMLVHVGLSEHAT
LIHNAWLKTLEEGIHTYDIFKEKTSKQKVGTKEFADAVIERLGQKPDTLPAAHYTTARHI
HHAPHSSTAKPQQELKGIDIFIRWDRDVELLAKQLQEASTPALKLKMVSNRGVKVWPNKM
PETACVDNWRCRFVPTKDGIASPQEIVDLLSSLVQKELVVTQTAYLFAFDGQPGYTLAQD
EQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaaacaataccgattactgtagcagaaggggatggaattggaccagaaatt
atggaagccacactccgcattttaaaagcctcaggagctcctcttgaaattcagaaagtc
gaaattggagaaaaggtctatttgcgcggccagcctacaggaatagatcctgcgacatgg
gatctcattcgacaatccaaagcctttctaaaagcgcctattacgaccccgcaaggaggc
ggatttaagagtttaaacgtcacggtacgtacaacgcttggcttatatgccaacgttaga
ccctgcgtcgcctattctccttttgtagaaaccaagcatccaggtatgaatgttgtcatc
gtaagggaaaacgaagaagatttgtataccggtattgaataccagcagacacctgacgtg
tacgaggctcttaagctcattacgcgccctggatgcgaaaaaattatccgctatgccttc
gaatacgctcaaacctaccagcgtaaaaaagttacctgctttaccaaagacaatatttta
aaactcactgatggactattccacaaggtgtttgaagagattggagccgagtacccgaat
atcgaaaaagaacactggatagtcgacatcggagcagccaaactggctgataccccagcc
gccttcgacgtggtcgtgatgcccaacctctatggagatatcttatcagatgttgcggct
caaattgcaggatcggtcggactagccggttctgctaacattggaacatcgggtgccatg
ttcgaagccattcatggttcggctcctcgccgcgccggacagaatttagccaatccttca
ggcctcctcttagccgcagtccaaatgctcgtccatgtgggcttgtcagagcatgcaact
ctcattcacaatgcctggcttaaaaccctggaagagggaatccatacttacgacatcttc
aaagaaaaaacaagcaagcaaaaagtcggaacgaaagaattcgcggatgctgtcattgaa
cgcttaggacagaaaccagacactctgcctgctgcccactatacaacagccaggcacatt
catcacgctccccattcatcgactgctaagccacaacaagaattgaaaggcatcgacatt
tttattcgttgggatcgcgatgtcgaactattagctaaacagctgcaagaagcttcgaca
cctgctttgaaattaaaaatggttagtaaccgcggagtcaaagtttggcccaataagatg
ccagaaacagcctgcgtcgataactggcgctgccgcttcgtcccaaccaaggatggcata
gcctctcctcaagagatcgttgatttactaagctcgctcgtacaaaaagaattggtcgtc
actcaaacggcctatctttttgctttcgacgggcagcctggctataccttggctcaggac
gaacaatag
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