Pseudoalteromonas nigrifaciens: PNIG_a1330
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Entry
PNIG_a1330 CDS
T05271
Symbol
ldcC
Name
(GenBank) lysine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00330
Arginine and proline metabolism
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
Module
png_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PNIG_a1330 (ldcC)
Enzymes [BR:
png01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PNIG_a1330 (ldcC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1_N
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Thioredoxin_16
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ASM53501
UniProt:
A0AAC9UIQ2
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Position
I:complement(1205275..1207161)
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AA seq
628 aa
AA seq
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MLIEQDPIILQELSTNLSKTIPNFERNDVHIDIIECLDLKQALEYVEEDGDIQAVVLSWD
VHNKGERTYSRFIEQLKGIRIELPVYVIGDDTKGLEIVNESEEIESFFFKDEVISDPEAI
LGYMINDFDDRGETPFWTAYRRYVGEANDSWHTPGHSGGSSFRNSPYIKDFYQFYGRNVF
VGDLSVSVDSLGSLSDSTNTIGRAQESAAATFEVKHTYFVTNGSSTSNKIILQTLLRKGD
KVIIDRNCHKSVHYGILQSASFPIYLSSILNPKYGIFAPPSLADIKQAIEQNTDAKLLVL
TGCTYDGLLSDLKQVVAFAHQHGIKVFIDEAWFAYSLFHPSLRYYSAIHAGADYITHSAH
KVVSAFSQASYIHINDPDFDADFFREIYSIYASTSPKYQLIASLDVCQKQLEMEGYKLLN
ALLKHVEEFKQQMASLNHIKVLGKQDFMEIFPHFSGDNMGHDPLKILIDISQLPYSLKDI
HKFLLDEIGLEIEKYTHSTILVLLTLGGTRSKIIRLYNALKKLDSGKVKLSTSTRRSRLP
ENLPAIDLACIPSDAFYGERESVPISKSNNRICAGLVTPYPPGIPLLVPGQHITEDHIEY
LKELAGQGLTIQGSFDGEIYVLKGKVKK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
ttgttaattgagcaagaccctatcatcttgcaagagctttcaacgaatctgtcgaaaacg
atccctaactttgagcgaaatgatgttcatatcgacataattgaatgtcttgatttaaag
caagcgttggaatatgtagaggaagatggcgatattcaagccgtggttctcagttgggat
gtacacaacaagggtgagagaacttatagtcgctttatcgagcagttaaaggggatccgt
atcgagttgcctgtgtatgttattggcgacgacacgaaaggattagagatagttaacgag
tcggaggaaattgagtctttcttttttaaagatgaggtaatttctgacccggaagcgatt
ttaggctatatgatcaacgacttcgatgatcgaggagaaaccccattctggacggcatat
cgtcgttatgttggcgaagcaaacgattcatggcacacacctggccatagtggcggctct
agctttagaaactctccctacatcaaagatttttatcagttttatggccgtaatgtattt
gttggcgacctgtcggtttcagtcgattcgctaggttcattgtcagacagtaccaatacc
attggccgtgctcaagaatcagccgcggcgacgtttgaagttaagcatacctatttcgtc
acgaacggttcatctacctcaaataaaatcattttgcagacactgctgcgcaagggcgat
aaagtaatcatcgaccgaaattgtcataaatcggtgcactatggcatattgcaatcagct
agttttcctatttatttgtcgagtattttaaatcctaaatatgggattttcgcgccaccc
tcgttggccgatataaagcaggcgatcgagcaaaataccgatgcaaaattgctggttctt
actggttgcacttacgatggcttactgagcgatttgaaacaagtggtagcgtttgcccat
caacatggtattaaagtgtttatcgacgaagcgtggtttgcttactccctttttcatccc
agcttacgctattattctgccattcatgctggagccgactatatcacccattctgcgcat
aaagtggtatcggcgttttctcaggcgtcttacattcatattaacgatccagattttgat
gccgatttctttcgagaaatttacagtatttacgccagcacatcgccaaagtatcagctt
atagcgtcgcttgacgtgtgccaaaagcagttagaaatggaaggctataagctgctcaat
gccttgctaaaacatgtggaagaatttaaacaacaaatggcctcgctcaaccatattaaa
gtgcttggtaagcaagactttatggaaatatttccgcattttagcggagacaatatgggc
catgatccactaaaaattctcatcgatattagtcaattgccttattcgttaaaagatatt
cataaattcctgctggatgaaattgggctagaaatagaaaaatacactcacagtactatc
ttggttttactgacgcttggaggtacgcgttcgaagatcattcgtctgtacaatgcatta
aaaaaactcgacagcggtaaggtaaaactgtcaacatcgacgcgtcgctcccgcttgccg
gagaatttacctgccatcgacctagcgtgtattccaagcgatgctttttatggcgagcgc
gaatctgtgcctattagcaaaagcaacaaccgcatttgtgccggtttagttacgccatat
ccaccgggcatcccactgttggttccggggcagcatataactgaagatcatatagagtat
ctgaaagagttagcgggacaaggattgacgattcaaggaagcttcgatggcgagatctat
gttcttaaaggcaaggttaagaagtaa
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