Ectopseudomonas mendocina ymp: Pmen_4223
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Entry
Pmen_4223 CDS
T00510
Name
(GenBank) ribose-5-phosphate isomerase
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00030
Pentose phosphate pathway
pmy00710
Carbon fixation by Calvin cycle
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01120
Microbial metabolism in diverse environments
pmy01200
Carbon metabolism
pmy01230
Biosynthesis of amino acids
Module
pmy_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Pmen_4223
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Pmen_4223
Enzymes [BR:
pmy01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
Pmen_4223
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Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
ABP86970
UniProt:
A4Y054
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All DBs
Position
4628666..4629379
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AA seq
237 aa
AA seq
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MDGYNCAFPVRQNSMTQDQLKQAVAQAAVDHILPRLDSKSIVGVGTGSTANFFIDALARH
KMDFDGAVASSEATAARLKGHGIPVYDLNSVSELEFYVDGADESDERLHLIKGGGAALTR
EKIVAAVAKTFICIADASKLVPVLGAFPLPVEVIPMARSHVARELVKLGGDPVYREGVLT
DNGNVILDVHNLSITDPVKLEADINAIVGVVTNGLFAARPADLLLLGTAEGVKTLKR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggatggctataattgcgcttttcccgtccggcagaactccatgacccaggatcagctc
aagcaggcggtggcccaggccgccgtcgaccacattctcccgcgcctcgacagcaagagc
atcgtcggcgtcggcactggctccaccgccaacttcttcatcgacgcgttggccaggcac
aagatggacttcgacggcgccgtggccagctccgaagccacggccgcccgcctcaagggc
catggcatcccggtctacgacctcaacagcgtcagcgagctggagttctatgtcgatggc
gccgacgagagcgacgagcgcctgcacctgatcaagggcggcggcgccgcgctgacccgc
gagaagatcgtcgccgccgtggccaagaccttcatctgcatcgccgatgccagcaagctg
gtgccggtgctcggcgccttcccgctgccggtggaggtgatccccatggcccgcagccac
gtggcccgcgagctggtgaagctgggcggcgacccggtgtaccgcgagggcgtgctgacc
gacaacggcaacgtcatcctcgacgtgcacaacctgtcgatcaccgacccggtgaagctg
gaggcggacatcaacgccatcgtcggcgtggtcaccaacggcctgttcgccgcccgcccg
gccgacctgctgctgctcggcaccgccgaaggcgtgaaaacgctcaagcgctga
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