Pirellula sp. SH-Sr6A: VN12_14970
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Entry
VN12_14970 CDS
T04360
Symbol
icd
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00020
Citrate cycle (TCA cycle)
pir00480
Glutathione metabolism
pir00720
Other carbon fixation pathways
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01120
Microbial metabolism in diverse environments
pir01200
Carbon metabolism
pir01210
2-Oxocarboxylic acid metabolism
pir01230
Biosynthesis of amino acids
pir04146
Peroxisome
Module
pir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pir_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VN12_14970 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
VN12_14970 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VN12_14970 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VN12_14970 (icd)
Enzymes [BR:
pir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
VN12_14970 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Isocitrate_DH_C_bact
Motif
Other DBs
NCBI-ProteinID:
AMV33426
UniProt:
A0A142Y2G5
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All DBs
Position
3692341..3693789
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AA seq
482 aa
AA seq
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MATPITVAHGDGIGPEIMAATLQIIQEAGAQLDIQTIEIGEKQYLKGNLAGIEPNAFQSL
RETKVFLKAPITTPQGGGFKSLNVTTRKAFGLYANVRPCLSYAPFVETKHPKMDVVIVRE
NEEDLYAGIEHRHTIDVMQCLKLISRPGSEKIVRYAFEYARAYGRKKVTCFTKDNIMKLT
DGLFHKIFDEIAAEYPDIENEHWIVDIGAAKLADTPEVFDVVVMPNLYGDILSDVAAQIA
GSVGLAGSANIGDGCAMFEAIHGSAPRRAGQNLANPSGLFLGAVQMLVHIGQASVAELAH
NAWLKTIEDGIHTYDIFDDKVSKQKVGTKEFAQAVVDRIGKKPEVLKAVDYSKAPSKPLT
SRPPYVRSQEKRELVGADVFCAFTGKPDELAAKLKPCEADGLVLEMLSNRGMKVWPGGME
ETFLVDVYRCRFQIPEGTPGAVEHKAITALMDRILKAGVEFVKMEGLFNFDGKPGFSRGQ
GQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccaattacagtcgcgcacggtgatggaatcggtcccgagatcatggcggcg
accctgcaaataatccaagaggcgggagcacagctcgatatccaaacgatcgagatcggt
gaaaagcaatacctcaaaggtaacttggcggggatcgagcccaacgcgtttcaaagtttg
cgagagaccaaggttttcttgaaggctccgatcacgacgccgcagggtggcgggttcaag
tcgttgaacgtgacgacgcgcaaggcattcgggctttatgccaacgtccgtccttgcttg
agctacgcaccgtttgtcgagaccaagcatccgaagatggatgttgtcatcgtccgggaa
aacgaagaggacttgtacgcggggatcgagcaccgtcatacgatcgacgttatgcagtgt
ctgaagctcataagccgacctggctccgagaagatcgttcgctatgcgttcgagtacgcg
cgggcttacggtcgcaaaaaggtgacttgcttcaccaaagacaacatcatgaagctgacc
gacggtctctttcataagatctttgacgagatcgcggcggagtatcccgacatcgagaac
gagcattggatcgtcgacatcggtgccgccaagctggccgatacaccggaagttttcgac
gtggtcgtcatgccgaacttgtacggcgatattctctcggacgtcgcggcccagattgca
ggttcggttggattggcaggtagtgcgaacattggcgacggttgtgcgatgttcgaagcg
atccacggttcggcacctcgccgcgccggtcagaatttggccaacccctccggacttttc
ttaggcgcggttcagatgctcgtccacatcgggcaagcgtcggtagccgagttggctcac
aacgcgtggctcaagacgatcgaagacggcatccatacgtatgacatcttcgacgacaag
gtttccaagcaaaaggttggaaccaaggagtttgcccaagcggtcgtggaccgaattggc
aagaaaccagaagtcctcaaggcggtcgactattcgaaggcaccttcgaagccactgacc
agccgaccaccctatgtgcgatcgcaagagaagcgagaactggtcggtgcggacgtgttc
tgcgcgttcacgggcaagcccgatgagcttgcggccaagctgaagccttgcgaggcggac
gggttggttctcgagatgctcagcaaccgcggaatgaaggtatggccaggcggaatggaa
gagacattcctcgtcgacgtctaccgatgccgattccaaattccagaagggactccggga
gcggtcgagcacaaagccatcactgctttgatggatcgcattctcaaagcgggcgtcgag
ttcgtgaagatggaaggtcttttcaatttcgacggcaagcctggattctccagaggccaa
ggacaataa
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