Pseudomonas fluorescens SBW25: PFLU_3809
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Entry
PFLU_3809 CDS
T00899
Name
(GenBank) Isocitrate dehydrogenase [NADP] (EC (Oxalosuccinate decarboxylase)
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pfs
Pseudomonas fluorescens SBW25
Pathway
pfs00020
Citrate cycle (TCA cycle)
pfs00480
Glutathione metabolism
pfs00720
Other carbon fixation pathways
pfs01100
Metabolic pathways
pfs01110
Biosynthesis of secondary metabolites
pfs01120
Microbial metabolism in diverse environments
pfs01200
Carbon metabolism
pfs01210
2-Oxocarboxylic acid metabolism
pfs01230
Biosynthesis of amino acids
pfs04146
Peroxisome
Module
pfs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFLU_3809
09102 Energy metabolism
00720 Other carbon fixation pathways
PFLU_3809
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFLU_3809
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFLU_3809
Enzymes [BR:
pfs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PFLU_3809
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
CAI2798007
UniProt:
C3JY66
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All DBs
Position
1:4202399..4204624
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGTK
AIPDHLAELGDLAVTPEANIIKLPNISASTPQLQAAIKELQAQGYALPDYPETVTTDAEK
ETRARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMSSGD
FYGSEKSVQIEAADAVKIELVAQDGTTTVLKEKTTVKAGEIIDSAVLSKKALRSFIAAEI
EDAKKQGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALAKHADVLAQIGFNLNNGIGDL
YARIKALPSDQQAQIEADIQAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEECKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQVKADGVVRVTDSKGNLLMEQKVEAGDIFRMCQTQDAPIQDWVKLAVNRARAS
NTPAIFWLDPKRAHDGVVVEKVQAYLKDHNTEGLDIRIMSPVDAMKFTLERTRKGLDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDTALQAQFGELAKTLAANEATIVAELNAVQGKPVDIGGYYAPNP
ELTSKAMRPSNTLNAAIAKLK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagccccagccctcgccacc
tattcactgctgcctatcgtagaggccttcaccgcttccgctgatattgccgtggaaacc
cgcgacatctccctcgcagggcgcatcctcgcaagcttccccgagcaactgggcaccaag
gctatcccggaccacctcgccgaactgggcgacctggccgttacacctgaagccaacatc
atcaagctgcctaacatcagcgcctcgaccccgcagctgcaagccgcgatcaaggaattg
caggcccagggctacgccctgccggactacccggaaaccgtaaccaccgacgcggaaaaa
gaaacccgtgcacgttacgacaaggtcaagggcagcgccgtgaacccggtactgcgcgaa
ggcaactccgaccgtcgcgctccgctgtcggtcaagaactatgcacgcaagcacccgcac
aaaatgggcgcctgggctgccgactccaaatcccacgttgcccacatgagcagcggcgac
ttctacggcagcgaaaaatccgtacagatcgaagccgctgacgctgtcaaaatcgagctg
gtcgctcaagacggcactaccaccgtcctgaaagaaaagaccacggtcaaggccggcgaa
atcatcgacagcgccgtgctgagcaaaaaagccctgcgcagcttcatcgccgctgaaatc
gaagacgccaagaagcaaggcgtactgctgtcggttcacctgaaagccaccatgatgaag
gtctccgacccgatcatgttcggccagatcgttgccgagttctataaagacgccctggcc
aagcacgccgacgtgctggcacagatcggcttcaacctgaacaacggcatcggcgacctg
tacgcgcgcatcaaggccttgcctagtgatcagcaagcgcagatcgaagctgacattcaa
gcggtctacgccgctcgcccttccctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtaccgagcgacgtcatcgtcgacgcctcgatgccggccatgatccgtgactcc
ggcaaaatgtggggcaccgacggccaactgcacgacaccaaggccgtgatcccggatcgc
tgctacgccaccatctaccaggcggtgatcgaagagtgcaaagccaacggcgctttcgac
cctaccaccatgggcagcgtgccaaacgttggcctgatggcgaaaaaagctgaagagtac
ggctcccacgacaagaccttccaggtcaaggctgacggcgtcgtccgcgtgaccgacagc
aagggcaacctgctgatggaacagaaagtcgaggctggcgacatcttccgcatgtgccag
acccaagacgcgccgatccaggactgggtcaaactggccgtcaaccgtgcccgcgccagc
aacaccccggccattttctggctggaccctaagcgtgcacacgatggcgtcgtggtcgag
aaagttcaggcctacctgaaagaccacaacaccgaaggcctggacatccgcatcatgtcg
ccggtcgacgcgatgaagttcaccctggagcgtacccgcaagggcctggacaccatctcg
gtgaccggtaacgtactgcgtgactacctgaccgacctgttcccgatcatggaactgggc
acaagcgccaagatgctgtcgatcgtgccgctgatgaacggcggtggcctgtttgaaacc
ggcgccggcggttcggctccgaagcacgtgcagcagctgctggaagaaaacttcctgcgc
tgggactccctgggtgagttcctggccctggccgcctcccttgagcatttgggtgtgacg
tacaacaacccgaaagccctggtactgtccaagaccctggaccaggccactggccagttc
cttgacaacaacaagtcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctacctggcgctgtactgggctcaagccctggccgcccagaccgaagacactgccctg
caagcgcagttcggcgaactggccaagaccctggccgcgaacgaagccaccatcgtggcc
gagctcaacgccgtacagggcaagccagtggacatcggcggctactacgcgccgaaccca
gagctgaccagcaaggccatgcgcccaagcaacaccctcaacgcggcgattgccaagttg
aagtaa
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