Pseudomonas protegens Pf-5: PFL_5087
Help
Entry
PFL_5087 CDS
T00249
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL_5087 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfl01007
]
PFL_5087 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_5087 (trpS)
Enzymes [BR:
pfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
PFL_5087 (trpS)
Amino acid related enzymes [BR:
pfl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PFL_5087 (trpS)
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFL_5087 (trpS)
Prokaryotic type
PFL_5087 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1f
NPCBM
Motif
Other DBs
NCBI-ProteinID:
AAY94315
UniProt:
Q4K6G7
LinkDB
All DBs
Position
complement(5848639..5849994)
Genome browser
AA seq
451 aa
AA seq
DB search
MTTRTRILTGITTTGTPHLGNYAGAIRPAIVASRDSNADSFYFLADYHALIKCDDPLRIQ
RSRQEIAATWLAGGLDVERVTFYRQSDIPEIPELTWLLTCVAAKGLLNRAHAYKASVDKN
VEAGEDPDAGITMGLYSYPVLMAADILMFNAHKVPVGRDQIQHVEMARDIGQRFNHLFGQ
GKEFFTMPEALIEESVATLPGLDGRKMSKSYDNTIPLFTSAKDMKDAISRIVTDSKAPGE
AKDPDNSHLFTLYQAFSTPAQAAEFRSELLHGLGWGEAKNRLFQLLDAELGEARERYHQL
IARPSDLEDILRAGAVKARAVATPFLNELREAVGLRSFAAQVQVAATTKKKAAKAARFIS
FREDDGSFRFRLLSADGEQLLLSRNFADGKAAGAVTKQLQSGQELDLRTEGNAFGIWLDG
ACVADSPDFADASARDAAVDALRIALTPAQD
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactactcgtacgcgtatcctcaccggcatcaccaccaccggcaccccgcacctgggc
aactatgccggtgcgatccgcccggcgatcgtcgccagccgcgacagcaatgccgactcc
ttctactttctggccgactaccacgcactgatcaagtgcgatgacccgctgcgtatccag
cgttcgcgccaggaaatcgccgccacctggttggccggtggcctggatgtggagcgcgtg
actttctatcgccagtcggacatcccggagatccccgagctgacctggctgttgacctgc
gtggcggccaaggggctgctcaaccgtgcccatgcctataaggcttcggtggacaagaat
gtcgaggccggtgaagacccggacgccggcatcaccatgggcttgtacagctacccggta
ctgatggcggcggacatcctgatgttcaacgcgcacaaggtgccggtgggccgcgaccag
atccagcacgtggaaatggcccgggacattggccagcgtttcaaccacctgttcggccag
ggcaaggagttcttcaccatgcccgaggcgctgatcgaggaaagtgttgccaccttgcca
ggcctcgatggccgcaagatgtccaagagttacgacaacaccatcccgctgttcaccagc
gccaaggacatgaaggacgcgatctcgcggatcgtcaccgactccaaggcgccaggcgag
gccaaggatccggacaactctcatttgttcaccctgtaccaggcgttctccacccctgcg
caagccgccgagttccgcagcgagctgcttcacggcctgggttggggcgaagccaagaac
cgcctgttccaattgctggatgccgaactgggcgaagcccgcgagcgttatcaccaactg
atcgcacgcccttcggacctggaagacatcttgcgtgccggcgccgtcaaggcccgtgcc
gtggccacgccgttcctcaacgaactgcgcgaagccgtgggcctgcgctctttcgccgcc
caggtacaggtggcagccaccaccaagaaaaaagccgccaaggccgcgcgtttcatcagc
tttcgagaggatgacggcagcttccgtttccgtttgctgtcggccgatggcgagcaactg
ctgctgtcgcgtaatttcgctgatggcaaggctgcaggtgctgtcaccaagcaactgcaa
tcgggccaggagctggatctgcggaccgagggcaatgcattcggtatctggctggacggc
gcctgtgtggcggacagcccggactttgccgatgccagcgcccgtgacgcggctgtagat
gcactgcgcatcgctctgaccccggcgcaggactaa
DBGET
integrated database retrieval system
