Paludibaculum fermentans: IRI77_23650
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Entry
IRI77_23650 CDS
T06895
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00020
Citrate cycle (TCA cycle)
pfer00630
Glyoxylate and dicarboxylate metabolism
pfer00785
Lipoic acid metabolism
pfer01100
Metabolic pathways
pfer01110
Biosynthesis of secondary metabolites
pfer01120
Microbial metabolism in diverse environments
pfer01200
Carbon metabolism
pfer01210
2-Oxocarboxylic acid metabolism
Module
pfer_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfer_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IRI77_23650
00630 Glyoxylate and dicarboxylate metabolism
IRI77_23650
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IRI77_23650
Enzymes [BR:
pfer01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
IRI77_23650
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
IRI77_23650
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
IRI77_23650
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
IRI77_23650
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
2-oxoacid_dh
Transket_pyr
2-oxogl_dehyd_N
DUF4043
Motif
Other DBs
NCBI-ProteinID:
QOY85803
UniProt:
A0A7S7NLF4
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All DBs
Position
6005914..6009660
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AA seq
1248 aa
AA seq
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MSSEPRQRITINSWLEEELYQDFVNNSSNVDESWKEKFEAEPAEEADEPAATTAVVAAPP
PTETPAPTPAPPQTVQVRPVAPAVPPVALSPADQLVPLKGAPMRIAENMTLSLTVPTATS
QRTIPVKVIDENRRLLNHWRDLHGKSKISYTHLIAWAMVKAIQKVPAINDAYAEIDGQAH
RVVRPEINIGIAVDVAGKDGHRSLVVPSIKNAGAKGFYEFLTAFDEIVAKSRTGKLTVDD
FKGTTVSLTNPGTVGTLGSVPRLMPGQGAIVATGSIDFPAEFQGVSEELRATLGVCKVMT
MSCTYDHRIIQGAESGQFLGKLQSLLEGSEGFYDEIFEQTRMPYQPFRWQVDRKAASSAF
RDEKRMEEIAKQAAVLQLINAYRVRGHLIADLNPLGVQPNYHPELDPTTYGLSIWDFDRE
FIIGNLATSGKQTIATLRTILETLRQTYCGRLGCEYMHIQHPEEKRWLQERMEPQANNWP
LEETAKRRVLLKLLQAESFENFLHTRFVGQKRFSLEGGESAMVVLDECLDRGADSGVQEV
VVGMAHRGRLTVLSNLIGKSMSQVFGEFEGNVDPEATQGSGDVKYHLGASGIQRTASGKE
IKVSLAPNPSHLEAVDPVVEGIVRAKQTWMGDVKREKVLPILVHGDAAFAGQGVVVETLN
MSQLNGYRTGGTIHLVINNQIGFTSTPDESRSSTYCTDVARTVQAPILHVNGDDPEACVR
ATQVAIDYRMRFKKDVVIDMICYRRYGHNEADDPSYTQPLMYKIIKAKKPIGTQYSERLT
KEGSVTKDAVERIRRQIQDALNAAHEEAQSKGEKWELQEVTTFEETTVPLVCPRTAVDEG
LIARVVEGMTTFPDTFTLHPKLKGFIEKRKEILKGGTADWATGEALAFGTLALEGTPVRL
SGQDSGRGTFSQRHLEYFDYNTGQVHTPLMHIDPQQARFEVFDSSLSEYGVMGFEFGYSL
GDPLTLTLWEAQFGDFANGAQIMIDQFVSSCEAKWGQPSGLVLLLPHGYEGQGPEHSSAR
LERFLQLCAENNMQVCNVTTPAQYFHLLRRQMYGGQDRRGLRKPLVLMTPKSLLRHAKAV
STLADFTHGHFEPVIGDTGTAAPDRVSRVIFCTGKIYYELVTEREKRGLNNVAILRLEQM
YPWPAEEIETMLWRYPSTAEIVWAQEEPRNQGAFLFVRDKLEPMLAATRRTLRYAGRQEA
AAPSTGSSKRHAQEHAAVMEDAFSAGPVRQRRYRVVAKAQKELVPGKA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagaaccgcgacagcgcatcacgatcaactcttggctggaagaagagctgtat
caagactttgttaacaacagcagcaacgtagacgagagctggaaagagaagtttgaggcg
gagccggccgaggaggctgacgagcccgcggccacgacggcagttgttgccgcgccgcct
cccactgagactccagccccgacgcctgctccgccgcagacagtgcaagtgcggccggtg
gctccggctgttcccccggtagcgctgagccccgccgaccagttggtgcccctgaagggc
gcgccgatgcggatcgcggagaacatgacgctgagcctgacggtgccgacggcgacgtcg
cagcggacgatcccggtgaaggtgatcgacgagaaccggcggctgctgaaccactggcgg
gacctgcacggcaagagcaagatcagctacacgcacctgatcgcgtgggcgatggtgaag
gcgatccagaaggtcccggccatcaatgatgcctatgcggagatcgacgggcaggctcat
cgcgtggtgcggccggagatcaacatcgggatcgcggtagacgtggcgggcaaggacggc
caccggtcgctggtggtgccgagcatcaagaacgccggggcgaaggggttctacgaattc
ctgaccgcattcgacgagattgtggcgaagtcgcggaccggcaagctgacggtggacgac
ttcaagggcacgacggtatcgctgacgaatcccgggacggtcgggacgctgggcagtgtg
ccgcggctgatgccgggccagggcgcgattgtcgccaccggcagcatcgattttccggcc
gagttccagggtgtcagcgaagagctgcgggcgactttgggcgtgtgcaaggtgatgacg
atgtcgtgcacgtacgaccatcgcatcattcagggcgccgagtccggccagttcctgggc
aagctgcagtcgctgcttgagggcagcgaaggcttctacgacgagatttttgaacagacc
cggatgccctaccagccgttccgctggcaggtggaccggaaggcggcgagttcggcattc
cgtgacgaaaagcggatggaggagatcgccaagcaggcggcggtgttgcaattgatcaat
gcctaccgcgtgcgcgggcacctgatcgccgacctgaatccgctgggcgtgcagccgaac
tatcacccggagctggatcccaccacctacgggctgagcatctgggatttcgaccgcgag
ttcatcatcggcaaccttgcgaccagcgggaagcagaccatagccacgctgcgtacgatt
ctggagacgctgcggcagacctactgcgggcggctgggctgcgagtacatgcacatccag
catccggaagagaagcgctggctgcaggagcggatggaaccgcaggccaacaactggccg
ctggaagagactgcgaagcgccgggtgctgctgaagctgctgcaggcggagagcttcgag
aacttcctgcatacgcggtttgtgggccagaagcggttttcgctggaaggcggcgagagc
gcgatggtggtgctggacgagtgcctggaccgcggcgcggacagcggcgtccaggaggtc
gtcgtcggcatggcacaccgcgggcggttgacggtgctgtcgaacctgattggcaagtcg
atgtcgcaggtgttcggcgagtttgaaggcaacgtggatccggaagcgacccagggctcg
ggcgacgtgaagtaccacctgggcgcgagcgggatccagaggacggcttccggcaaggag
atcaaggtctcgctggcgccgaatccgagccacctggaagcagtggatccggtggtggaa
ggcatcgtccgcgcaaagcagacgtggatgggcgacgtgaagcgcgagaaggttctgccg
atcctggtgcacggtgacgcggcttttgcgggccagggcgtggtggtggagacgctcaac
atgtcgcagttgaacggctaccggacgggcggcacgatccacctggtgatcaacaaccag
atcgggttcacgtcaacgccggacgagagccggtcgtcgacctactgtacggacgtggca
cggacggtgcaggcccccatcctgcatgtgaacggcgacgatccggaagcgtgtgtgcgg
gcgactcaggttgcgatcgactaccggatgcggttcaagaaggatgtcgtcatcgacatg
atctgctaccgccggtatggacataacgaggcggacgatccgagctacacgcagccgttg
atgtacaagatcatcaaggcgaagaagccgattgggacgcagtactccgagcggctgacg
aaggaagggtcggtcacgaaggatgcggtggagcggatccgccggcagatccaggatgcc
ttgaatgcggcgcacgaagaggcgcagtcgaagggcgagaagtgggaactgcaggaagtg
accaccttcgaagagaccacggttcctttggtttgcccacggacggcggtggatgagggt
ttgattgcgcgcgtcgtggaaggcatgaccaccttcccggacaccttcacgctgcatccg
aagctgaaggggttcatcgagaagcgcaaagagatcctgaagggcggtacggcggactgg
gcgacgggcgaggccctggcgttcggtaccctggcgctggaagggactccggtgcggttg
agcggacaggacagcggccgcggcacgttctcgcaacgccatctggagtatttcgactac
aacaccggccaggtgcacacgccgctgatgcacatcgatccgcagcaggcgcggtttgag
gtgttcgacagctctctgtcggaatacggcgtgatgggcttcgagttcggctattcgctg
ggcgacccgctgacgctgaccctgtgggaagcgcagttcggcgatttcgcgaatggcgcg
cagatcatgatcgaccagttcgtgtcgtcgtgcgaagcgaagtggggccagccgagcggg
ctggtattgctgctgccgcatggctacgaggggcaaggtccggaacactccagcgcccgg
ctggagcgtttcctgcagctttgcgccgagaacaacatgcaagtctgcaacgtgacgacg
ccggcgcagtatttccacctgctgcggcgccagatgtacggcgggcaggaccggcgcggg
ttgcgcaagccgctggtgctgatgacgccgaagagcctgctgcggcatgcgaaggcggtg
agcacgctggccgacttcacgcacgggcattttgaaccggtgattggagatacggggacg
gctgctccggaccgcgtgtccagggtcatcttctgcacgggcaagatctactacgagttg
gtgacggaacgcgaaaagcgcgggttgaacaacgtagcgatcctgcggctggagcagatg
tatccgtggccggcggaagagatcgagaccatgctgtggcggtacccgtcgacagcggag
atcgtctgggctcaggaagagccgcggaaccagggtgcgttcctgtttgtccgcgataag
ctggagccgatgctggcggcgacacggcgtaccttgcgctatgcgggccggcaggaagcg
gcggcgccctccaccgggtcgagtaagcggcatgcgcaggagcatgcggccgtgatggaa
gatgccttcagcgccgggccggtgcggcagcggcggtaccgggtggtcgccaaggcccag
aaggaactggtgccgggcaaagcctga
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