Pectobacterium colocasium: PJ912_25005
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Entry
PJ912_25005 CDS
T08961
Symbol
sdaA
Name
(GenBank) L-serine ammonia-lyase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00260
Glycine, serine and threonine metabolism
pcoa00270
Cysteine and methionine metabolism
pcoa01100
Metabolic pathways
pcoa01110
Biosynthesis of secondary metabolites
pcoa01200
Carbon metabolism
pcoa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PJ912_25005 (sdaA)
00270 Cysteine and methionine metabolism
PJ912_25005 (sdaA)
Enzymes [BR:
pcoa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
PJ912_25005 (sdaA)
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Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
MmgE_PrpD_N
DUF2790
Motif
Other DBs
NCBI-ProteinID:
WED68708
LinkDB
All DBs
Position
complement(4843742..4845106)
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AA seq
454 aa
AA seq
DB search
MISVFDMFKIGIGPSSSHTVGPMKAGKQFVDELIDQDLLTATTRIAVDVYGSLSLTGKGH
HTDIAIIMGLAGNMPDTVDIDAIPGFIRDVEQRERLLLANGQHEVDFPREGGMVFRSENL
PLHENGMTITAFAGNKEIYSKTYYSIGGGFIVDEEHFGKDTAADVSVPYTFHSAKEMLEH
CKQSGLSLSGMVMRNELALHSRQDIDAYFADIWQTMRACIDRGMNTEGVLPGPLRVPRRA
SALRRMLVSSDKLSNDPMNVVDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY
DHFIEPVSPTIYIRYFLAAGAVGILYKMNASISGAEVGCQGEVGVACSMAAAGLAELMGA
SPEQVCVAAEIGMEHNLGLTCNPVAGQVQVPCIERNAIASVKAINAARMATRRTSEPRVS
LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgataagcgttttcgacatgtttaagatcggtattggcccctctagctctcatacggtt
ggaccgatgaaagccggtaagcaatttgtcgatgaattgatcgaccaggatttactgacc
gcgacgacgcgtattgccgtcgatgtgtatggctcgctgtcgctaacgggtaaaggtcac
cacacagacatcgccatcatcatgggtctggcgggtaacatgccggatacggttgatatt
gatgccattcccggtttcatccgcgatgttgagcaacgcgaacgcctgctgctggctaat
gggcagcatgaagtcgatttcccacgcgaaggcggcatggttttccgcagtgaaaatttg
ccattgcacgaaaacggcatgaccatcaccgcctttgccggcaataaagaaatttatagc
aaaacctattactccatcggcggtggttttatcgtcgatgaagagcattttggcaaagac
accgccgctgacgtctccgttccttacacattccattccgctaaagagatgctggagcac
tgtaaacagagtggcctgtcgctttccgggatggtgatgcgtaacgagctggcgctgcac
agccgtcaggatattgatgcgtacttcgccgatatctggcagaccatgcgtgcctgtatc
gatcgcggcatgaacaccgaaggtgttttacccggcccactgcgcgtaccacgtcgtgct
tctgcgctgcgccgtatgctggtgtcttccgacaagctgtctaacgacccgatgaacgtg
gtggactgggttaatatgttcgcgctggcggtaaatgaagaaaacgccgcaggtggccgc
gtggtgaccgcgccaacaaacggcgcgtgcggcatcgtccctgccgttctcgcttattac
gaccactttatcgaaccggttagcccgactatttatattcgttatttcctcgcggcaggc
gcggtaggcattctgtataaaatgaacgcttccatctccggtgccgaagtgggctgtcag
ggtgaagtcggcgtggcctgctcgatggccgccgccgggctggcagaactgatgggggcc
agtccggaacaagtttgcgtcgccgccgagatcggtatggaacacaacctgggcttaacc
tgcaatccggttgctggtcaggtacaggttccgtgcatcgaacgtaacgccattgcttcc
gttaaggcgattaacgctgctcgcatggcaacccgccgtaccagcgaacctcgcgtctcg
ctggataaggtgattgaaaccatgtacgaaacgggtaaagacatgaacgccaaataccgc
gaaacctcacgaggtgggctggcgatcaaagtacagtgtgattaa
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