PATHWAY: rsi01100 Help Entry rsi01100                    Pathway                                 Name Metabolic pathways - Runella slithyformis Class BRITE hierarchy Pathway map rsi01100   Metabolic pathways Module rsi_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rsi01100] rsi_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rsi01100] rsi_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rsi01100] rsi_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rsi01100] rsi_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rsi01100] rsi_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rsi01100] rsi_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rsi01100] rsi_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rsi01100] rsi_M00015   Proline biosynthesis, glutamate => proline [PATH:rsi01100] rsi_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rsi01100] rsi_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rsi01100] rsi_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rsi01100] rsi_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rsi01100] rsi_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rsi01100] rsi_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rsi01100] rsi_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rsi01100] rsi_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rsi01100] rsi_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rsi01100] rsi_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rsi01100] rsi_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rsi01100] rsi_M00082   Fatty acid biosynthesis, initiation [PATH:rsi01100] rsi_M00083   Fatty acid biosynthesis, elongation [PATH:rsi01100] rsi_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rsi01100] rsi_M00087   beta-Oxidation [PATH:rsi01100] rsi_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rsi01100] rsi_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rsi01100] rsi_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rsi01100] rsi_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rsi01100] rsi_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rsi01100] rsi_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rsi01100] rsi_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rsi01100] rsi_M00155   Cytochrome c oxidase, prokaryotes [PATH:rsi01100] rsi_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rsi01100] rsi_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rsi01100] rsi_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rsi01100] rsi_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rsi01100] rsi_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:rsi01100] rsi_M00535   Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:rsi01100] rsi_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rsi01100] rsi_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rsi01100] rsi_M00621   Glycine cleavage system [PATH:rsi01100] rsi_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:rsi01100] rsi_M00793   dTDP-L-rhamnose biosynthesis [PATH:rsi01100] rsi_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rsi01100] rsi_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rsi01100] rsi_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rsi01100] rsi_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rsi01100] rsi_M00970   Proline degradation, proline => glutamate [PATH:rsi01100] rsi_M00972   Proline metabolism [PATH:rsi01100] Organism Runella slithyformis [GN:rsi] Related pathway rsi00010   Glycolysis / Gluconeogenesis rsi00020   Citrate cycle (TCA cycle) rsi00030   Pentose phosphate pathway rsi00040   Pentose and glucuronate interconversions rsi00051   Fructose and mannose metabolism rsi00052   Galactose metabolism rsi00053   Ascorbate and aldarate metabolism rsi00061   Fatty acid biosynthesis rsi00071   Fatty acid degradation rsi00074   Mycolic acid biosynthesis rsi00100   Steroid biosynthesis rsi00130   Ubiquinone and other terpenoid-quinone biosynthesis rsi00190   Oxidative phosphorylation rsi00220   Arginine biosynthesis rsi00230   Purine metabolism rsi00240   Pyrimidine metabolism rsi00250   Alanine, aspartate and glutamate metabolism rsi00260   Glycine, serine and threonine metabolism rsi00261   Monobactam biosynthesis rsi00270   Cysteine and methionine metabolism rsi00280   Valine, leucine and isoleucine degradation rsi00290   Valine, leucine and isoleucine biosynthesis rsi00300   Lysine biosynthesis rsi00310   Lysine degradation rsi00311   Penicillin and cephalosporin biosynthesis rsi00330   Arginine and proline metabolism rsi00332   Carbapenem biosynthesis rsi00340   Histidine metabolism rsi00350   Tyrosine metabolism rsi00360   Phenylalanine metabolism rsi00361   Chlorocyclohexane and chlorobenzene degradation rsi00362   Benzoate degradation rsi00364   Fluorobenzoate degradation rsi00380   Tryptophan metabolism rsi00400   Phenylalanine, tyrosine and tryptophan biosynthesis rsi00401   Novobiocin biosynthesis rsi00405   Phenazine biosynthesis rsi00410   beta-Alanine metabolism rsi00430   Taurine and hypotaurine metabolism rsi00440   Phosphonate and phosphinate metabolism rsi00450   Selenocompound metabolism rsi00460   Cyanoamino acid metabolism rsi00470   D-Amino acid metabolism rsi00480   Glutathione metabolism rsi00500   Starch and sucrose metabolism rsi00511   Other glycan degradation rsi00520   Amino sugar and nucleotide sugar metabolism rsi00521   Streptomycin biosynthesis rsi00523   Polyketide sugar unit biosynthesis rsi00525   Acarbose and validamycin biosynthesis rsi00540   Lipopolysaccharide biosynthesis rsi00541   O-Antigen nucleotide sugar biosynthesis rsi00542   O-Antigen repeat unit biosynthesis rsi00543   Exopolysaccharide biosynthesis rsi00550   Peptidoglycan biosynthesis rsi00552   Teichoic acid biosynthesis rsi00561   Glycerolipid metabolism rsi00562   Inositol phosphate metabolism rsi00564   Glycerophospholipid metabolism rsi00592   alpha-Linolenic acid metabolism rsi00600   Sphingolipid metabolism rsi00620   Pyruvate metabolism rsi00623   Toluene degradation rsi00625   Chloroalkane and chloroalkene degradation rsi00630   Glyoxylate and dicarboxylate metabolism rsi00633   Nitrotoluene degradation rsi00640   Propanoate metabolism rsi00643   Styrene degradation rsi00650   Butanoate metabolism rsi00660   C5-Branched dibasic acid metabolism rsi00670   One carbon pool by folate rsi00680   Methane metabolism rsi00710   Carbon fixation by Calvin cycle rsi00720   Other carbon fixation pathways rsi00730   Thiamine metabolism rsi00740   Riboflavin metabolism rsi00750   Vitamin B6 metabolism rsi00760   Nicotinate and nicotinamide metabolism rsi00770   Pantothenate and CoA biosynthesis rsi00780   Biotin metabolism rsi00785   Lipoic acid metabolism rsi00790   Folate biosynthesis rsi00860   Porphyrin metabolism rsi00900   Terpenoid backbone biosynthesis rsi00906   Carotenoid biosynthesis rsi00907   Pinene, camphor and geraniol degradation rsi00910   Nitrogen metabolism rsi00920   Sulfur metabolism rsi00930   Caprolactam degradation rsi00946   Degradation of flavonoids rsi00999   Biosynthesis of various plant secondary metabolites rsi01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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