KEGG   PATHWAY: raa00970
Entry
raa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rahnella aquatilis HX2
Class
Genetic Information Processing; Translation
Pathway map
raa00970  Aminoacyl-tRNA biosynthesis
raa00970

Organism
Rahnella aquatilis HX2 [GN:raa]
Gene
Q7S_t22587  tRNA-Ala [KO:K14218]
Q7S_t22703  tRNA-Ala [KO:K14218]
Q7S_t22615  tRNA-Ala [KO:K14218]
Q7S_t22617  tRNA-Ala [KO:K14218]
Q7S_t22579  tRNA-Arg [KO:K14219]
Q7S_t22581  tRNA-Arg [KO:K14219]
Q7S_t22583  tRNA-Arg [KO:K14219]
Q7S_t22697  tRNA-Arg [KO:K14219]
Q7S_t22667  tRNA-Arg [KO:K14219]
Q7S_t22619  tRNA-Arg [KO:K14219]
Q7S_t22625  tRNA-Asn [KO:K14220]
Q7S_t22633  tRNA-Asn [KO:K14220]
Q7S_t22637  tRNA-Asn [KO:K14220]
Q7S_t22599  tRNA-Asp [KO:K14221]
Q7S_t22701  tRNA-Asp [KO:K14221]
Q7S_t22601  tRNA-Asp [KO:K14221]
Q7S_t22645  tRNA-Cys [KO:K14222]
Q7S_t22665  tRNA-Gln [KO:K14223]
Q7S_t22661  tRNA-Gln [KO:K14223]
Q7S_t22559  tRNA-Glu [KO:K14224]
Q7S_t22689  tRNA-Glu [KO:K14224]
Q7S_t22679  tRNA-Glu [KO:K14224]
Q7S_t22597  tRNA-Glu [KO:K14224]
Q7S_t22707  tRNA-Glu [KO:K14224]
Q7S_t22683  tRNA-Gly [KO:K14225]
Q7S_t22589  tRNA-Gly [KO:K14225]
Q7S_t22565  tRNA-Gly [KO:K14225]
Q7S_t22567  tRNA-Gly [KO:K14225]
Q7S_t22647  tRNA-Gly [KO:K14225]
Q7S_t22569  tRNA-Gly [KO:K14225]
Q7S_t22695  tRNA-His [KO:K14226]
Q7S_t22585  tRNA-Ile [KO:K14227]
Q7S_t22705  tRNA-Ile [KO:K14227]
Q7S_t22571  tRNA-Leu [KO:K14228]
Q7S_t22643  tRNA-Leu [KO:K14228]
Q7S_t22659  tRNA-Leu [KO:K14228]
Q7S_t22671  tRNA-Leu [KO:K14228]
Q7S_t22673  tRNA-Leu [KO:K14228]
Q7S_t22693  tRNA-Leu [KO:K14228]
Q7S_t22675  tRNA-Leu [KO:K14228]
Q7S_t22677  tRNA-Leu [KO:K14228]
Q7S_t22607  tRNA-Lys [KO:K14229]
Q7S_t22653  tRNA-Lys [KO:K14229]
Q7S_t22655  tRNA-Lys [KO:K14229]
Q7S_t22651  tRNA-Lys [KO:K14229]
Q7S_t22649  tRNA-Lys [KO:K14229]
Q7S_t22573  tRNA-Met [KO:K14230]
Q7S_t22593  tRNA-Met [KO:K14230]
Q7S_t22595  tRNA-Met [KO:K14230]
Q7S_t22591  tRNA-Met [KO:K14230]
Q7S_t22657  tRNA-Met [KO:K14230]
Q7S_t22663  tRNA-Met [KO:K14230]
Q7S_t22575  tRNA-Met [KO:K14230]
Q7S_t22563  tRNA-Phe [KO:K14231]
Q7S_t22669  tRNA-Phe [KO:K14231]
Q7S_t22691  tRNA-Pro [KO:K14232]
Q7S_t22557  tRNA-Pro [KO:K14232]
Q7S_t22577  tRNA-Ser [KO:K14233]
Q7S_t22621  tRNA-Ser [KO:K14233]
Q7S_t22623  tRNA-Ser [KO:K14233]
Q7S_t22627  tRNA-Ser [KO:K14233]
Q7S_t22631  tRNA-Ser [KO:K14233]
Q7S_t22629  tRNA-Ser [KO:K14233]
Q7S_t22561  tRNA-Thr [KO:K14234]
Q7S_t22681  tRNA-Thr [KO:K14234]
Q7S_t22687  tRNA-Thr [KO:K14234]
Q7S_t22603  tRNA-Thr [KO:K14234]
Q7S_t22605  tRNA-Thr [KO:K14234]
Q7S_t22699  tRNA-Trp [KO:K14235]
Q7S_t22685  tRNA-Tyr [KO:K14236]
Q7S_t22635  tRNA-Tyr [KO:K14236]
Q7S_t22639  tRNA-Val [KO:K14237]
Q7S_t22641  tRNA-Val [KO:K14237]
Q7S_t22609  tRNA-Val [KO:K14237]
Q7S_t22613  tRNA-Val [KO:K14237]
Q7S_t22611  tRNA-Val [KO:K14237]
Q7S_05370  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
Q7S_16050  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Q7S_03205  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Q7S_07395  asnC; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
Q7S_00130  glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
Q7S_00135  glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
Q7S_14300  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Q7S_07015  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Q7S_20275  pyridoxal phosphate-dependent enzyme [KO:K01042] [EC:2.9.1.1]
Q7S_16565  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Q7S_08490  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Q7S_01875  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Q7S_19700  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Q7S_16150  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Q7S_19270  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Q7S_03660  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
Q7S_08285  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Q7S_04195  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Q7S_04990  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Q7S_14280  pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
Q7S_14275  pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
Q7S_13780  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Q7S_01360  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
raa00250  Alanine, aspartate and glutamate metabolism
raa00260  Glycine, serine and threonine metabolism
raa00270  Cysteine and methionine metabolism
raa00290  Valine, leucine and isoleucine biosynthesis
raa00300  Lysine biosynthesis
raa00330  Arginine and proline metabolism
raa00340  Histidine metabolism
raa00380  Tryptophan metabolism
raa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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