Oncorhynchus tshawytscha (Chinook salmon): 112228239
Help
Entry
112228239 CDS
T05605
Symbol
pigw
Name
(RefSeq) phosphatidylinositol-glycan biosynthesis class W protein
KO
K05283
glucosaminylphosphatidylinositol acyltransferase [EC:2.3.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
otw01100
Metabolic pathways
Module
otw_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
112228239 (pigw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GWT1
PPP4R2
Motif
Other DBs
NCBI-GeneID:
112228239
NCBI-ProteinID:
XP_024249172
LinkDB
All DBs
Position
LG30:46714795..46721191
Genome browser
AA seq
501 aa
AA seq
DB search
MSSQKELKEAFVSNLNGTSLGEVALGSFLAPLCLISRGLFLILYHLGRGALPLPWIAHLV
LDFSMIILPLVLSCTVLSDILHLVILGLTVVSGAVLCYIYRTKRPTRPTRPSATSKDTAA
KSFFQSHVQCDQVPFVTIFRVLVNVKTAISILAVDFSVFPRRYAKTETYGTGVMDFGVGA
YVLANALVCPEARRKEVSGSKLSQVVKQLVSVWPLVILGLARLVSVKMSGYHEHVSEYGV
HWNFFFTLAIVRVAASVLLALFPVNGSWLLALLIGGLYQVTLEMSGLKYSIIHNNDRTGG
FLQANMEGVSSVVGYIAIYMAGVQIGLYVMRPRTQVKEWIRVIWNLLLGSAVLYTGLILC
QASVEPVSRRMANLPFCLWTIAQSMFFLSCLATADVILFFMKTVSGCVLVSSSWYPCRKE
ASVSEEKMEKKVEGLCLIQAVNRNQLLFFMLANLLTGITNVLVDTFNSSDYISVCVLLSY
MFINSFAIYILHLMKITVKFW
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcagaaggaattgaaggaggcgtttgtcagcaatctgaatgggaccagcctt
ggggaagttgccctgggctcctttctggccccactgtgcctgatcagcagaggactgttt
ctgattctataccatctgggtaggggggcgctccccctcccctggatcgcccacctcgtc
ctggacttctccatgatcatactgcccctggtcttatcatgtaccgttctgagtgacatc
cttcacctagtcatcctgggcctgactgtcgtgtctggggctgtgctatgctatatctac
cgtaccaaaaggccaaccaggccaaccaggcccagcgcaacttctaaggacactgctgcc
aagagcttcttccagagccatgttcagtgcgaccaggtgccctttgtgacgatctttcga
gtcctggtcaatgtgaaaacggccattagcattctagctgtcgacttcagcgtgttccca
agacgctatgcaaaaacagaaacctatggaacaggggttatggactttggtgttggagcc
tatgtcctcgccaacgccctggtctgcccagaggcacggaggaaggaagtctcaggatcc
aagttaagccaagtggttaaacagctcgtgtctgtctggcccctggtcattctaggcttg
gccaggctggtgagtgtgaaaatgtctggttaccacgagcacgtgtctgagtacggcgtg
cactggaatttcttcttcaccctagccatagtccgagtggcggcctctgtgctattggct
ctgttccctgtcaacgggtcatggctcctggcccttctgattggaggactttaccaagtg
accctggagatgtctggactgaagtattccatcatccacaacaatgacaggacgggaggc
tttctgcaagccaacatggagggcgtttcatctgttgtgggctacatagccatctatatg
gcaggggtccagattggactgtatgtaatgcgaccaaggacacaggtcaaagagtggatc
agagtgatttggaatctcttattgggaagtgctgtgttgtatactggcttgatcctgtgt
caggcctctgttgagccagtgtctcgcaggatggccaatctaccgttctgcctctggacc
attgcccagtccatgtttttcttgtcctgtttagcaactgctgatgttattttgtttttt
atgaaaacggtatcgggttgcgtactggtgtcgtcttcctggtatccttgtagaaaggaa
gcctctgtatctgaggagaaaatggagaagaaagttgagggactttgtctcattcaagct
gtcaaccgtaatcagttgttgtttttcatgcttgccaatttactgactggaatcacaaat
gtgctcgtagatacattcaatagtagtgattacatttctgtgtgtgttttgctgtcatac
atgttcataaatagttttgcaatatatattttacatctcatgaaaatcacagtaaaattc
tggtaa
DBGET
integrated database retrieval system
