Oryzias latipes (Japanese medaka): 101158062
Help
Entry
101158062 CDS
T02443
Symbol
tyms
Name
(RefSeq) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00240
Pyrimidine metabolism
ola00670
One carbon pool by folate
ola01100
Metabolic pathways
ola01232
Nucleotide metabolism
ola04981
Folate transport and metabolism
Module
ola_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
101158062 (tyms)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
101158062 (tyms)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
101158062 (tyms)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
101158062 (tyms)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thymidylat_synt
SVIP
Motif
Other DBs
NCBI-GeneID:
101158062
NCBI-ProteinID:
XP_004081178
LinkDB
All DBs
Position
20:20255961..20258711
Genome browser
AA seq
320 aa
AA seq
DB search
MPATSEIHSEEQRRESVCEAAERRSAEEKQSGFLCDERGYLDLVKHILQNGRRKGDRTGT
GVLSVFGAQVRYSLRDQFPLLTTKRVFWKGILEELLWFIKGSTSAKELSDKGVKIWDANG
SRAFLDNLGFTDREEGDLGPVYGFQWRHFGAEYKDMHTDYTGKGVDQLQNIIDTIKKNPE
DRRIIMCAWNPKDLPLMALPPCHALCQFYVCDGELSCQLYQRSADMGLGVPFNIASYALL
TYMIAHITGLQPGDFVHTLGDAHVYVNHAEPLQEQLQRDVRPFPKLKIKRTVANIDDFTA
EDFEICGYSPHPAIKMQMAV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacctccgaaatccacagcgaagagcagcggcgggaatccgtctgtgaggcg
gcggagaggcggagcgccgaggagaagcagtccgggtttctatgcgacgaacgcgggtat
cttgacttggtgaagcacatcctgcagaatggaagaaggaaaggagaccgaaccggaacc
ggagttctgtctgtgttcggtgcccaggtcaggtacagtctgcgagatcagtttcctttg
ctgacgaccaaaagagttttctggaaagggattctggaggagctgctgtggttcatcaag
gggtccacaagcgccaaggagctgtcggacaaaggcgtcaagatttgggacgccaacggg
tcccgcgccttcctggacaacctgggattcacggacagagaggagggggacctgggaccc
gtttatggcttccagtggaggcactttggggcagaatacaaagacatgcacacagactac
acaggcaaaggggtcgaccagctgcagaacattatcgacaccatcaagaagaacccagag
gaccggcggatcatcatgtgtgcctggaaccccaaagacctgcccctcatggccctgccc
ccctgccacgccctttgccagttctacgtgtgcgacggcgagctgtcctgccagctctac
cagcggtcggctgatatgggcctgggggtgcccttcaacatcgccagctacgcgctgctc
acgtacatgattgcacacatcacggggttgcagcccggcgactttgtccacaccctggga
gacgcccacgtctacgtcaaccacgccgagcctctgcaggagcagcttcagagggacgtc
aggcctttccccaaactgaagatcaagaggacggtggcgaacatcgacgacttcacagct
gaggactttgaaatctgtggctacagccctcatcccgccatcaagatgcagatggctgtg
tga
DBGET
integrated database retrieval system