Sciurus carolinensis (gray squirrel): 124992075
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Entry
124992075 CDS
T08117
Name
(RefSeq) tryptophan--tRNA ligase, mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124992075
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124992075
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124992075
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
124992075
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
124992075
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124992075
Prokaryotic type
124992075
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF2067
Motif
Other DBs
NCBI-GeneID:
124992075
NCBI-ProteinID:
XP_047418932
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Position
1:102788635..102863054
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AA seq
360 aa
AA seq
DB search
MALLSMRKARGCWSFIRALHKGPEPAPAPKKNSMERIFSGIQPTGIPHLGNYLGAIESWV
RLQDEHDTVLYSIVDLHSITIPQDPAILRQSILDMTAALLACGINPEKSILFQQSQVSEH
TQLNWILTCMVRLPRLQHLHQWKAKTAKQKHNETVGLLTYPVLQAADILSYKSTHVPVGE
DQIQHMELVQDLAQGFNKKYGEFFPVPKSILTSLKKVKSLRDPSSKMSKSDSDKLATVRI
TDSPEEIVQKFRKAVTDFTSEVTYDPASRAGVSNMVAIHAAVTGLTTEEVVRRSAGIDTA
HYKLMVADAVIEKFAPIKTEIEKLKMDKEHLEKVLRTGSAKAKELAYPVLQEVKKLVGIL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctctcaatgcggaaggcgcgtggatgctggagcttcatccgggcacttcat
aaaggacctgaaccagctcccgctccaaagaaaaacagcatggagcggatattttctggt
attcaacctacaggaatcccccacctgggaaattacctgggagccattgagagctgggtg
aggttacaggatgaacatgacacagtgctgtatagcatcgtggacctccactccatcacc
atccctcaagaccctgccatccttcggcagagcattctggatatgactgcagctcttctt
gcttgtggcataaacccagaaaaaagcatcctttttcaacaatctcaggtgtctgaacac
acacaattaaattggatccttacctgtatggtcaggctgcctcgattacagcatttacac
cagtggaaggcaaaaactgccaagcagaagcacaacgagactgtgggcctgctcacatac
ccagtactccaagcagccgacattctgtcctacaagtccacacacgttcctgtaggggag
gaccaaatccagcacatggaactagttcaggatctagcacaaggtttcaacaagaagtat
ggggagttctttccagtgcccaaatccattctaacatccctgaagaaggtaaaatccctt
cgtgacccttcttccaaaatgtcaaaatcagactctgacaaactggccactgttcgaata
acagacagcccagaggagatagtgcagaaattccgcaaggctgtgacggacttcacctcg
gaggtcacctacgaccctgccagccgagcaggcgtctccaacatggtcgcaatccacgct
gcggtgaccgggctcaccacagaggaggtagtccgccgcagcgcgggcatcgacactgcc
cactacaaactgatggtggcagatgctgtgattgagaaatttgctccaattaagactgaa
attgaaaaactgaagatggacaaggaacatttagagaaagttttacgaactgggtcagca
aaagccaaagaattagcctatcctgtgctccaggaggtgaaaaaattggtgggaattcta
tag
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