Candidatus Nitrosopelagicus brevis: T478_0313
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Entry
T478_0313 CDS
T03537
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T478_0313 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nbv01007
]
T478_0313 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_0313 (trpS)
Enzymes [BR:
nbv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
T478_0313 (trpS)
Amino acid related enzymes [BR:
nbv01007
]
Aminoacyl-tRNA synthetase
Class I (G)
T478_0313 (trpS)
Transfer RNA biogenesis [BR:
nbv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
T478_0313 (trpS)
Prokaryotic type
T478_0313 (trpS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
AJA91918
UniProt:
A0A0A7UZ68
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All DBs
Position
complement(264617..265729)
Genome browser
AA seq
370 aa
AA seq
DB search
MSSDEFVVTPWNVEGDIDYDKLTKQFGTQKISPEILSKIKKITGEDHFMLRRGIFFSHRD
LNVILDNFEKGKKFFLYTGRGPSGNTHIGHLVPWVFAKWLQEKFDVNIYFQLTDDEKFYT
KSDLTLEDTSKFALENALDFIALGFNPEKTKIIINTRNIRRLYPIAAQVAKKINFSNTKA
VFGFTNDTNVGMIFYTSLQSAPCFIEDLPVLIPLGVDQDPHFRITRDVAPKINKPKPALI
HNIMIPALTGPGGKMSASDEKSTIYTTDSPQVVKKKINKYGFSGGQVDIEKHRELGGNPD
IDVSFQYLRIFFEQDDDKLKKIYEDYKSGKMLTGELKAILIEKINSFLKIHQQKREEAKK
NLSKFLLSDE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagatgaatttgtcgtaacgccatggaatgttgaaggcgacatagattatgac
aaattaaccaaacaatttggcactcagaagatttcacctgaaattctatcaaaaataaag
aaaatcacaggagaagatcatttcatgttaagaagaggaattttcttttctcatagagat
ctaaatgtaattttagataattttgaaaaaggtaagaaattcttcttgtatacaggacga
ggtccttcaggtaatacacacataggtcacttagttccatgggtttttgcaaaatggtta
caagaaaaatttgatgtgaatatctattttcagttaacagatgatgaaaaattttataca
aaatctgacctgacgcttgaagacacaagtaaatttgcgttagaaaatgcgcttgacttt
attgcacttggattcaatccggaaaaaacaaaaattataatcaatactcgaaatataagg
agactgtaccctattgcagctcaagttgcaaaaaaaattaatttctcaaatacaaaagct
gtgtttggttttacaaacgatacgaatgttggaatgattttctatacatctttacaatca
gcaccatgtttcattgaagacttaccagtgttaattccactcggagtagaccaagatcct
catttcagaattacacgtgatgttgcgccaaaaataaacaaaccaaaaccagcattgata
cacaacatcatgattccagcattgacaggacctggtggaaaaatgtctgcttctgatgaa
aaatcaaccatttacacgacagattctccacaagtggtaaaaaagaagattaacaaatat
ggattttcaggtggacaggttgatattgaaaaacacagagaacttggaggaaacccagac
attgatgtctcttttcaatacttgagaatattttttgaacaagatgatgataaattaaag
aaaatttatgaagattacaaatcaggcaaaatgttaactggagaattaaaagcaatctta
attgaaaagattaattcatttttgaaaatacatcaacaaaagcgggaagaggcaaaaaag
aatttatcaaaattcttactatcagatgaataa
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