Limnobacter profundi: HKT17_05995
Help
Entry
HKT17_05995 CDS
T06583
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
limn
Limnobacter profundi
Pathway
limn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HKT17_05995 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limn01007
]
HKT17_05995 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limn03016
]
HKT17_05995 (trpS)
Enzymes [BR:
limn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
HKT17_05995 (trpS)
Amino acid related enzymes [BR:
limn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HKT17_05995 (trpS)
Transfer RNA biogenesis [BR:
limn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HKT17_05995 (trpS)
Prokaryotic type
HKT17_05995 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QJR29292
LinkDB
All DBs
Position
1295337..1296374
Genome browser
AA seq
345 aa
AA seq
DB search
MFAERVLSGMRPTGLLHLGHYHGVLKNWVKLQNEFPCLFFVADWHALTTHYETPEVIKEN
VWDMVVDWLAAGVDPEKATLFVQSKVPEHAELHLLLSMNTPLSWLERVPTYKDQQEKLSD
KDLGTYGFLGYPLLQSADILIYRATRVPVGEDQVPHIELTREIARRFNHFYSKEKLLDAK
GAEIGRKPILLEPKALLTEASKMPGLDGMKMSKSYQNTLALRETPENISQKVRKMPTDPA
RVRRTDPGDPAKCPVWQLHEVYSDASTKQWVQEGCKSAGIGCIQCKEPIIQAVTDELAPM
RERAAMYTENPTLVRKIISEGCERARAMANDTMQDVRKHMGLDYS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgaacgcgtattgtcgggcatgcgcccaaccggtttgttgcaccttggccat
taccacggtgtgttgaaaaactgggtgaaacttcaaaacgaatttccctgtctgtttttt
gtggccgattggcatgcgctgaccacgcattatgaaactccggaagtcatcaaggaaaat
gtgtgggacatggtggttgactggctggctgcgggtgttgaccccgagaaggccaccttg
tttgttcagtccaaggtgcctgagcatgctgagctgcatttgttgctgtcgatgaataca
cctttaagctggcttgagcgcgtgcctacctacaaagaccaacaggaaaaacttagcgac
aaagacctgggcacctatggctttttgggctaccccttgttgcagtcggctgacattctg
atttaccgtgccacacgagtaccggtgggtgaagaccaggtgccccacatcgagctgacc
cgcgaaattgcgcggcgcttcaatcatttttacagcaaggaaaaactgctggatgcgaag
ggggctgaaattggccgcaagccgattttgctggaacccaaagccttgctgaccgaggcc
agcaagatgccagggttggatggcatgaaaatgtccaagagctaccaaaacacgctggcc
ttgcgggaaacacccgagaacatttcccagaaagtacgcaaaatgccaacggacccggcc
cgcgtgcgccgcaccgacccgggtgatcctgccaaatgccctgtttggcaattgcacgag
gtgtattcagacgccagcaccaagcagtgggtgcaggaaggttgcaaatcggcgggcatt
ggctgtattcagtgcaaagagccaattattcaggcagtaaccgacgagttggcgcctatg
cgcgaacgtgcagccatgtacaccgaaaacccgacattggtgcgaaaaatcatcagcgaa
ggctgtgagcgcgcacgtgcgatggccaacgacacgatgcaggatgtgcgcaagcacatg
gggctggattattcctga
DBGET
integrated database retrieval system
