Lates calcarifer (barramundi perch): 108894996
Help
Entry
108894996 CDS
T04895
Name
(RefSeq) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00240
Pyrimidine metabolism
lcf00670
One carbon pool by folate
lcf01100
Metabolic pathways
lcf01232
Nucleotide metabolism
lcf04981
Folate transport and metabolism
Module
lcf_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
108894996
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108894996
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
108894996
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
108894996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thymidylat_synt
Motif
Other DBs
NCBI-GeneID:
108894996
NCBI-ProteinID:
XP_018549162
UniProt:
A0AAJ7VE75
LinkDB
All DBs
Position
LG24:14260224..14263095
Genome browser
AA seq
383 aa
AA seq
DB search
MAGNLAFQSERASLFSRDVEVIRGRLLACQNHPGKFHSDPSQQSDFVAGFALKSSVLFVH
KMPATSEIHAEQQLHAEDGCKKKEESLAAEKKTFGVLCDERGYLDQIEYIMQHGRRKGDR
TGTGVISVFGAQARYSLRDQFPLLTTKRVFWKGILEELLWFIKGSTNAKELSAKGVKIWD
ANGSRDFLDNLGFTDREEGDLGPVYGFQWRHFGAEYTNMHADYTGQGVDQLQKVIDTIKK
NPEDRRIIMCAWNAKDLPLMALPPCHALCQFYVCDGELSCQLYQRSGDMGLGVPFNIASY
ALLTYMIAHITGLKPGDFVHTLGDAHIYINHIEPLKVQLQREIRPFPKLKILRKVENIDD
FHAEDFEICDYNPHPTIKMQMAV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaacctcgcgtttcagtcagagcgcgcctcgctgttctcgcgagatgtggaa
gtcatccgtggacgcctgctggcatgtcaaaatcacccgggaaagttccactctgaccct
tcacaacagagcgactttgtagcaggttttgcgctgaaatcgtccgtgctttttgtccac
aaaatgcccgccacttcagaaatccacgcagagcagcagctgcacgcggaggacggctgt
aagaagaaggaagagagtctggctgcggagaagaagacgtttggtgttctctgcgatgaa
cgcgggtacctggatcagatcgagtacatcatgcagcacggccgcaggaagggagaccga
accgggacaggagtcatctctgtgttcggtgctcaggccagatacagtctgcgagaccag
tttcccttgctgacaaccaagagagtgttctggaaggggatccttgaagagttgctgtgg
tttattaagggatcaacaaatgccaaggagctctcagcgaaaggggtgaagatttgggat
gccaacgggtcccgggatttcctggacaaccttgggttcacggacagagaggagggcgac
ctgggacctgtgtacggtttccagtggaggcacttcggggcagagtacacaaacatgcat
gcagattacacaggacaaggtgttgaccagctgcagaaagtcattgacaccatcaaaaag
aatccagaagacagacggatcatcatgtgcgcttggaacgccaaagacctgcccctcatg
gctctgcccccctgccacgccctctgccagttctacgtgtgtgatggtgagctgtcgtgt
cagctgtaccagcggtcgggcgacatgggtctgggagtgcctttcaatatcgccagctac
gcacttcttacctacatgatcgcccacatcacaggcctcaagcctggtgactttgttcac
accctgggggatgctcacatctacatcaaccacattgaacctctcaaagtacagctccag
agggagatccggcccttccccaagctgaagatcctgaggaaggtggagaacattgatgat
ttccacgcagaggactttgagatttgtgactacaacccccatcccaccattaagatgcag
atggctgtgtaa
DBGET
integrated database retrieval system