Ictalurus punctatus (channel catfish): 108269868
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Entry
108269868 CDS
T04658
Symbol
wars1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108269868 (wars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108269868 (wars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108269868 (wars1)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
108269868 (wars1)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108269868 (wars1)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108269868 (wars1)
Prokaryotic type
108269868 (wars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
PepSY_2
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-GeneID:
108269868
NCBI-ProteinID:
XP_017331460
Ensembl:
ENSIPUG00000014705
UniProt:
W5UK05
LinkDB
All DBs
Position
9:5322350..5332718
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AA seq
474 aa
AA seq
DB search
MADCQGDVACDLTPMQLYEKLNLQGDQVRVLKSEKAAKAEIDAAVQLLLKLKVHYKTITG
QEYKAGCPPTDDISSCSNGPATEDGDDQVDPWNVSTTSAKGVDYDKLIVRFGSSKIDQEL
IDRIGRIIEQTPHRFLRRGVFFSHRDMHQVLDAYENKKSFFLYTGRGPSSEAMHVGHLIP
FIFTKWLQDVFNVPLVIQMTDDEKYLWKDLTQEQCYRFAVENAKDIIACGFDVNKTFIFS
DLDYMGMSSSFYRNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPQI
FNSRTDLQCLIPCAIDQDPYFRMTRDVAPRVGYPKPALLHSTFFPALQGAQTKMSASDPN
SSIFLTDTPKQIKTKVNKHAFSGGKDTVEEHRKYGGNPDVDVSFMYLTFFLEDDEQLEKI
RQDYTSGALLTGDLKKCLIETLQPMIASHQERRKQVTDDMVKQFMTPRKLDFDF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcagactgtcagggagacgttgcttgtgatctgacgcccatgcaactttatgagaaa
ctgaacctccaaggagaccaagtccgagtcctaaagtcagagaaggctgctaaagctgag
atcgatgctgctgtacagctgctgctcaagctgaaggttcattacaaaacaatcacaggg
caagaatacaaggccggttgtccccccactgacgacatatcatcatgcagtaatggacca
gctacagaggatggagatgaccaggtggacccctggaacgtgtccaccaccagtgccaaa
ggagtggattacgacaagctcatagtgaggttcggaagcagtaagattgatcaggaactg
atcgacagaattggcagaatcatagagcaaacacctcaccgcttcctccgccgaggagtc
ttcttctctcacagagatatgcatcaggtcctggacgcctacgagaacaagaagtcgttc
tttctgtacacaggcagagggccttcctcagaagcgatgcatgtgggccaccttattcct
ttcatcttcactaagtggcttcaggatgtgtttaacgtgcctttggtcatccagatgacc
gatgatgagaagtatctgtggaaggatctgacgcaggagcagtgctaccgctttgctgtg
gagaatgccaaagacatcatcgcctgtggatttgatgtcaacaagaccttcattttctca
gatctagactatatgggcatgagttcatcattctatagaaatgtggtgaaaatacagaag
catgtaacttttaaccaagttaaaggcatatttggattcacagacagtgactgcattgga
aagattagttttcctgcaatacaggcagctccttccttcagcagctctttcccgcaaatc
ttcaacagcaggacagatttgcagtgtctcatcccctgtgctattgaccaggacccatat
ttccgcatgacacgagacgttgctcctcgagtaggctaccccaagcctgctcttctgcac
tccacttttttccctgcattgcaaggagctcagaccaagatgagcgctagtgacccgaac
tcctccatcttcctgactgacacacccaaacagatcaaaacgaaggtcaacaagcatgca
ttctccggggggaaagacactgtagaggagcacaggaaatatggaggaaacccagatgtg
gacgtgtcattcatgtacttgactttcttcctcgaagatgacgaacagctggagaaaatc
cgacaggactataccagtggagcactcctgactggcgatcttaagaaatgtctaatcgaa
acccttcaaccaatgatcgcatctcaccaagagagacgcaaacaagttacagatgacatg
gtcaagcagtttatgactccacggaagctagacttcgatttctag
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