Herbaspirillum rubrisubalbicans: Hrubri_3416
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Entry
Hrubri_3416 CDS
T04238
Symbol
xylB
Name
(GenBank) D-xylulose kinase
KO
K00854
xylulokinase [EC:
2.7.1.17
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00040
Pentose and glucuronate interconversions
hrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Hrubri_3416 (xylB)
Enzymes [BR:
hrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.17 xylulokinase
Hrubri_3416 (xylB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FGGY_N
FGGY_C
Ribosomal_L12_N
ROK
Motif
Other DBs
NCBI-ProteinID:
ALU90576
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Position
3994134..3995615
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AA seq
493 aa
AA seq
DB search
MSYLGIDLGTSEVKLVLTDPDSNIIATRSARLRVDHPHPLWSEQAPQAWWNATLDAIATL
RATAPQAFQALRGIGISGQMHGATLLDRNGNVLRPAILWNDMRAHAECVELEALVPDAAD
ITGNRAMPGFTAPKLLWLSKYEPAVYRAIDKVLLPKDYLGWKLTGEFVSEMSDAAGTLWL
DVARRDWSERMLHATGLSRSHMPRLVEGSAVAGHLREDLRREWGISAPVVVAGGAGDNAA
SAVGIGVIQAGDAFLSLGSSGVLFAATAQHAPNPQQGVHAFCHCLPGQWHQMSVILSAAA
SLHWLAGVLGREVPELVSAAERLTPEQQAQAPLFLPYLNGERTPHNDAAAKGVLFGMTSA
HEAAHLAYAVMEGVAFAMADGYAALQAAGTVLHSAAFVGGGSRSAFWGQLCATALGIPLR
HHAGAEVGAALGAARLGRLAQTGEDVRDVCVAPEVLERYAPDQARQSQLMRRLEQYRRLY
PCLAPEFFAFSSP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgagctatctgggcatcgaccttggcacctccgaagtcaagctggtcctgaccgaccct
gactccaacatcatcgccaccagaagtgcgcggctgcgggtggaccatccgcatccgctg
tggtccgaacaagccccgcaggcctggtggaacgccaccctggacgccatcgccacgcta
cgcgccacggccccgcaagccttccaggcgctgcgcggcatcggtatctcggggcagatg
catggcgccaccctgctggaccgcaacggcaacgtactgcgcccggccatcctgtggaac
gacatgcgtgcgcacgccgagtgcgtggagctggaagcgctggtcccggatgccgccgac
atcaccggcaatcgcgccatgccgggctttaccgcccccaagctgctgtggctgtcgaag
tatgaaccggcggtctaccgcgccatcgacaaggtcttgctgcccaaggattacctgggc
tggaagctgaccggcgaattcgtctccgagatgtcggatgcggccggcacgctgtggctg
gatgtggcccggcgcgactggtccgagcggatgctgcacgccacgggcctgagccgcagc
cacatgccgcgcctggtcgaaggcagcgccgtggccggccacctgcgcgaggacttgcgc
cgcgaatggggcatcagcgcgccggtggtggtggccgggggcgccggcgacaatgccgcc
agcgcggtgggtatcggcgtgatccaggccggcgacgccttcctctcgctgggcagctca
ggcgtcttgttcgccgccaccgcacagcacgcgcccaatccccagcagggcgtacacgcc
ttctgccactgcctgcccggccaatggcaccagatgagcgtgatcctgtcggccgcggcc
agcctgcactggctcgcgggcgtgctgggacgcgaggtgcctgagctggtgagcgccgcc
gaacgactgacgcctgagcagcaggcgcaagcgcccctgttcctgccctacctgaacggc
gagcgcacgccgcataacgatgccgcggccaagggtgtgctgtttggcatgacatccgca
catgaggcggcgcacctggcctatgcggtgatggaaggcgtggcctttgccatggccgat
ggctatgctgccttgcaggcggctggcaccgtgctgcacagtgcggccttcgtgggagga
ggctcgcgcagcgcgttctgggggcaattgtgtgcgaccgccttggggattcccctgcga
caccatgccggggcggaagtgggcgcggcgctgggggcggcgcgtttggggcgtcttgcg
cagaccggcgaggatgtgcgtgatgtgtgcgtggcgcccgaggtgctggaacgctatgca
ccggaccaggcaaggcaatcacaactcatgcgcaggctggaacaatatcgacgcctgtac
ccctgcctggcgccggaattctttgcattttcttcgccctga
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