Geomonas nitrogeniifigens: KP003_09870
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Entry
KP003_09870 CDS
T07937
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
gnt
Geomonas nitrogeniifigens
Pathway
gnt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP003_09870 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gnt01007
]
KP003_09870 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gnt03016
]
KP003_09870 (trpS)
Enzymes [BR:
gnt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
KP003_09870 (trpS)
Amino acid related enzymes [BR:
gnt01007
]
Aminoacyl-tRNA synthetase
Class I (G)
KP003_09870 (trpS)
Transfer RNA biogenesis [BR:
gnt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KP003_09870 (trpS)
Prokaryotic type
KP003_09870 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
QXE88676
LinkDB
All DBs
Position
complement(2268070..2269053)
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AA seq
327 aa
AA seq
DB search
MSNNRIVSGMRPTGKLHLGHYHGVLSNWMELQRNFECFFFAADWHSLTTEYASTDGIQDS
INEMVLDWLAFGIDPEQSVIFKQSRVPQHAELNLILSMITPVSWLERNPTYKEMQENLTT
KDLSTFGFLGYPVLMASDIIVYKAARVPVGQDQIPHLEITREIARRFNYLYGEVFPEPAA
LLTETPKVLGIDGRKMSKSYGNAIFLSDTAEETRKKVMSMVTDTLRPFKRDPGEPDRCVA
FTLHSLYVDAEKRAEIVEGCRGAQLGCVDCKKILAQAMVDTLAPFREKRVELTEKPGLVE
EVLAEGSRKAEVVAKQTMDEARAALKV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaccgtatcgttagcggcatgagacctaccggaaagctgcacctggggcac
taccacggggttctgtccaactggatggaattgcagcgcaacttcgagtgcttcttcttc
gccgccgactggcactccttgaccaccgagtacgccagcacggacggtatccaggacagc
atcaacgagatggtgctcgactggctcgctttcggaatcgaccccgagcagagcgtgatc
ttcaagcagagccgggtgccgcagcacgctgagctgaacctgatcctctccatgatcacc
ccggtctcctggctggagcgcaacccgacctacaaggagatgcaggagaacctcaccacc
aaggacctctccaccttcggcttcctcggttacccggtgctcatggcctcggacatcatc
gtgtacaaggcggcccgcgtgccggtggggcaggaccagatcccgcacctcgagatcacc
cgcgagatcgcgcgccgcttcaactacctctacggtgaggtattcccggagccggccgcg
ctcctgaccgagacccccaaggtgctcggcatcgacggccgcaagatgagcaagagctac
ggcaacgctatattcctctccgacaccgccgaggagaccaggaaaaaggtcatgtccatg
gtcaccgacacgctgcgccccttcaagcgcgatccgggcgagcctgaccgctgtgtagcc
ttcaccctgcattccctctacgtcgacgccgaaaagcgtgccgagatcgtcgaggggtgc
cgcggagcccagcttggctgcgtagactgcaagaagatcctggcccaggccatggtggac
accctggcgccgttccgcgagaagcgcgtggaactgaccgagaagccgggcctggtggaa
gaggtgctcgccgaaggtagccgcaaggccgaagtggtcgccaagcagaccatggacgaa
gccagagccgcacttaaagtctag
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