Formosa sediminum: FNB79_03670
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Entry
FNB79_03670 CDS
T06103
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
fop
Formosa sediminum
Pathway
fop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FNB79_03670 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fop01007
]
FNB79_03670 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fop03016
]
FNB79_03670 (trpS)
Enzymes [BR:
fop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
FNB79_03670 (trpS)
Amino acid related enzymes [BR:
fop01007
]
Aminoacyl-tRNA synthetase
Class I (G)
FNB79_03670 (trpS)
Transfer RNA biogenesis [BR:
fop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FNB79_03670 (trpS)
Prokaryotic type
FNB79_03670 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
QDO93111
UniProt:
A0A516GNK6
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All DBs
Position
818913..819884
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AA seq
323 aa
AA seq
DB search
MARILTGVQSTGTPHLGNILGAILPAIKMSGIDTNDSYLFIADMHSLTQIKDAETLRYNT
YSVAATWLACGLDIEKVVFYRQSDIPQTTELSWYLSCFFPYQRLTLAHGFKDKADRLEDV
NAGLFTYPMLMAADILLYDAEIIPVGKDQLQHIEMTRDVASRFHAKMGGETFVLPEGKIQ
EDGMLIPGTDGSKMSKSKDNLINIFLDDKKLRKQVMSIQTDSTPLEAPKDWSSCNCFAIY
SLLANENQITQMKANYEAGNYGYGHAKQALFELIVEKFSKERERFSYYMNNLDEIDKILA
IGAEKAKTVANNTLKRVRDKVGY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaattttaactggtgttcaaagtacaggaaccccacatttaggaaacatttta
ggagcaatacttcccgcaataaaaatgtcgggaatagacacaaacgactcgtatttattt
atcgccgacatgcattctttaactcaaattaaagatgccgagacgttaagatataatact
tacagtgtagctgcaacttggcttgcttgtggtttagatattgaaaaagtggtattttac
agacagagtgatattccgcaaacaacagaattaagttggtatttaagttgtttttttcca
taccagcgtctaaccttagcccatggctttaaggataaagcagatcgcttagaagatgtc
aatgctggattgtttacataccctatgctaatggctgcagatattttgttatacgatgct
gaaattattccggttggaaaagatcaattacaacatattgaaatgacccgagatgttgca
tctcgttttcatgcaaaaatgggtggagaaacgtttgttcttcctgaaggaaaaattcaa
gaagacggcatgcttattcctggaacagatggctctaagatgagtaaaagtaaagacaac
ctcatcaatatctttttagatgataaaaagttacgtaaacaagtaatgagcatacaaaca
gatagcacgcccttagaagcccctaaagactggagcagctgtaattgttttgctatatat
agtttattagctaacgaaaatcagattacccaaatgaaagccaattatgaggctggaaat
tatggatatggccacgctaaacaagctttatttgaactcatagttgaaaaattttctaaa
gaacgtgaacgctttagttattatatgaataaccttgatgaaattgataaaatcttagct
attggtgctgaaaaagctaaaacagttgcaaacaacaccttaaaacgagttcgagataaa
gttggttattaa
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