Flavobacterium collinsii: TRV642_0010
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Entry
TRV642_0010 CDS
T08703
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00280
Valine, leucine and isoleucine degradation
fcs00630
Glyoxylate and dicarboxylate metabolism
fcs00640
Propanoate metabolism
fcs00720
Other carbon fixation pathways
fcs01100
Metabolic pathways
fcs01120
Microbial metabolism in diverse environments
fcs01200
Carbon metabolism
fcs04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TRV642_0010 (scpA)
00640 Propanoate metabolism
TRV642_0010 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
TRV642_0010 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TRV642_0010 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
TRV642_0010 (scpA)
Enzymes [BR:
fcs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
TRV642_0010 (scpA)
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Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
IMPDH
Motif
Other DBs
NCBI-ProteinID:
CAI2765118
UniProt:
A0A9W4X1Q5
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All DBs
Position
TRV642:8157..10298
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AA seq
713 aa
AA seq
DB search
MIRKDLTHITLDVDSAKLDVQKPDSESPLQNFTTAEGIELKKKYADKDIEDLEFLNFGAG
FAPNLRGPYATMYVRRPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSIAFDLPTHRGYD
SDHERVVGDVGKAGVAIDSVEDMKVLFDQIPLDEMSVSMTMNGAVLPIMAFYIVAAEEQG
VSIEKLSGTIQNDILKEFMVRNTYIYPPTPSMKIIADIFEFTSKKMPKFNSISISGYHMQ
EAGATADIELAYTLADGLEYIRTGLSTGMTIDDFAPRLSFFWAIGMNHFMEIAKMRAGRM
IWAKLVQQFNPKSDKSLALRTHCQTSGWSLTEQDPFNNVARTCIEATAAAFGGTQSLHTN
ALDEAIALPTDFSARIARNTQIFLQEETKITKTVDPWGGSYYVESLTDEILKSTWKLIEE
VEELGGMTKAIEAGIPKLRIEEAAARKQARIDSGQDIIVGVNQYRLEKEDPLHILDVDNQ
MVRKQQIDQLTTIKETRDTEKVNQSLEKLIHCAKTGEGNLLAIAIEAARNRATLGEISDA
LESIFGRFKAQIKSFSGVYSAAIKNDENFEKAKQLADAFAKQEGRRPRIMIAKMGQDGHD
RGAKVVATGYADVGFDVDIGPLFQTPAEAAKQAVENDVHILGVSSLAAGHKTLVPQVIEE
LKKHGREDIMVIVGGVIPAQDYQFLFDAGAVAVFGPGTKISEAAIKILEILID
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgattagaaaagaccttacacatattacattagatgtcgacagtgcaaagttagacgta
cagaagcctgactcagaatccccacttcagaacttcacaacagctgaagggattgagctc
aaaaaaaagtacgctgacaaagatattgaagatttagagttcctgaatttcggagccgga
tttgcacccaatttgcgcggaccttatgctacaatgtacgtgagacgtccgtggacgatt
cgtcaatatgcaggattttcgaccgcagaagaaagtaatgctttttacagaagaaattta
gctgccggacaaaaaggactttccattgcttttgacctaccaacccatcgaggttatgat
tcagatcatgagcgggtagttggtgatgttggaaaagccggagtagcaatcgattctgtc
gaagacatgaaagtattgtttgatcagattccactagacgaaatgtcggtttcgatgacg
atgaatggagccgttttacctattatggctttttatattgttgctgccgaagaacaaggt
gtatctattgaaaaattatccggaaccatccaaaacgatatcctgaaagagttcatggta
cgtaatacttacatttacccaccaactccttcgatgaaaatcatcgctgatatttttgaa
tttacgagcaaaaaaatgccaaaattcaattctatttctatttctggatatcacatgcag
gaagccggtgctactgccgatattgaattggcttataccttggcagatggtcttgagtat
atcagaaccggactttcaacgggaatgactattgacgattttgctccaagattgtctttc
ttttgggccattggaatgaatcactttatggaaattgccaaaatgagagccggtcgaatg
atttgggcaaaattagtacaacaattcaatcctaaaagtgacaaatctttagccctgaga
acacattgtcaaaccagtggctggagtttaacagaacaggatccttttaacaatgtagcc
agaacttgtatcgaggccacagcggcagcctttggcggaacacaatcactccatacaaat
gcgctagatgaagctattgctttaccaactgatttctcggcaagaattgcccgaaacacg
caaatctttctacaggaagaaactaaaatcaccaaaacggttgatccgtggggaggaagc
tattatgtagaaagccttaccgatgaaatcctgaaaagtacctggaaactgattgaagaa
gtcgaggaactaggcggaatgacaaaagccattgaagccggaattccgaaattaagaatc
gaagaagcagcagcaagaaaacaagcaagaatagacagcggacaagatataattgtaggt
gtaaatcaatatcgtttagaaaaagaagatcctttgcatattctggatgttgacaaccaa
atggtacgtaaacagcaaatcgatcagcttacaacaattaaagaaacaagagatactgaa
aaagtaaatcaatcactcgaaaaattaattcattgtgcaaaaaccggagaaggaaactta
ttagcgattgcaattgaagccgcccgaaacagagcgactttaggagaaattagcgatgct
cttgaaagtatattcggcagattcaaagcacaaattaaatcctttagcggtgtgtatagt
gcagcaataaaaaacgacgagaattttgaaaaggcaaaacaattagcagatgcctttgcc
aaacaggaaggaagacgtccgagaattatgattgcaaaaatgggtcaggacggacatgac
cgaggcgcaaaagtagtggctacgggttatgccgatgtaggtttcgacgtagacataggt
ccgcttttccagacgccagctgaagctgccaaacaagctgttgaaaatgacgttcacatt
ctaggtgtttcatcactcgctgccggacacaaaactctggtacctcaggtaattgaagaa
cttaaaaaacacggacgagaagatattatggtcatagtgggaggagtaattccggcacag
gattaccaatttctctttgatgccggagcagtagctgtatttggtccaggaacaaaaatt
agtgaagctgctattaaaattttagaaattttaatagattaa
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