Flavobacterium cyclinae: LOS86_12690
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Entry
LOS86_12690 CDS
T08416
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
fcc
Flavobacterium cyclinae
Pathway
fcc03030
DNA replication
fcc03430
Mismatch repair
fcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOS86_12690 (ssb)
03430 Mismatch repair
LOS86_12690 (ssb)
03440 Homologous recombination
LOS86_12690 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcc03032
]
LOS86_12690 (ssb)
03400 DNA repair and recombination proteins [BR:
fcc03400
]
LOS86_12690 (ssb)
03029 Mitochondrial biogenesis [BR:
fcc03029
]
LOS86_12690 (ssb)
DNA replication proteins [BR:
fcc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOS86_12690 (ssb)
DNA repair and recombination proteins [BR:
fcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LOS86_12690 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
LOS86_12690 (ssb)
Mitochondrial biogenesis [BR:
fcc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
LOS86_12690 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Intein_splicing
Ppnp
SBDS
MtmB
Motif
Other DBs
NCBI-ProteinID:
UGS20860
LinkDB
All DBs
Position
2788121..2788516
Genome browser
AA seq
131 aa
AA seq
DB search
MNGTLNKVILIGHLGDEVKMHYFEGGNCIGRFPLATNEVYINKTTGEKITSTEWHNIVVR
NKAAEICEKYLSKGDKIYIEGRIKSRQWQAEDGATKYTTEIQVTEFTFLTTKKDTDLSKS
SLPTGSAPEDF
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaacattaaacaaggttattttaatcggtcatttaggtgacgaagttaaaatg
cattactttgaaggcggaaattgcattggtcgttttcctttagcaactaacgaagtgtac
attaacaaaactactggagaaaaaataacttctacagaatggcacaacattgttgttcga
aacaaagctgcagaaatttgcgaaaaatacctttctaaaggcgataaaatatacattgag
ggtcgaatcaaatcgcgtcaatggcaagcagaagacggtgctaccaaatacactactgaa
attcaggtaaccgaattcacattcttaaccactaaaaaagacaccgatttgagtaaatct
tcattaccaacaggtagtgcacctgaagatttttaa
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