Flavobacterium channae: LOS89_12795
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Entry
LOS89_12795 CDS
T08502
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
fcb
Flavobacterium channae
Pathway
fcb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOS89_12795 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcb01007
]
LOS89_12795 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcb03016
]
LOS89_12795 (trpS)
Enzymes [BR:
fcb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
LOS89_12795 (trpS)
Amino acid related enzymes [BR:
fcb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LOS89_12795 (trpS)
Transfer RNA biogenesis [BR:
fcb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LOS89_12795 (trpS)
Prokaryotic type
LOS89_12795 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF4247
Motif
Other DBs
NCBI-ProteinID:
UGS23617
LinkDB
All DBs
Position
2751483..2752451
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AA seq
322 aa
AA seq
DB search
MAKILTGVQSTGTPHLGNLLGAILPAIKMAENPDNQSFLFIADLHSITQIKNGAELRQNT
YSTAATWLACGLNTDKVIFYRQSDVPQTAELSWYLSCFFPFQRLTLAHSFKDKADRLEDV
NAGLFTYPMLMAADILLYDANIVPVGKDQLQHIEITRDVASRFNHQMGETFVLPEGKTSE
ETMYVPGTNGGKMSKSANNFINIFLDDKALRKQIMGIQTDSTPLEEPKNPDTCNCFALYK
ILATPEQTEVMRANYLGGNYGYGHAKQELFELILDKFGPIREKYNYYINNLEEVDRLLLE
GAAKAGEVANGVLKRVREKLGY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattttaaccggagttcaaagtacaggaacgcctcacttaggaaacttatta
ggagcaattttacctgcaattaaaatggcagaaaatcctgataatcaatcatttcttttc
attgccgatttgcactcaattacgcaaatcaaaaatggagcagaattaagacaaaatacc
tatagtacggcagcaacttggcttgcttgcggattaaatactgataaagtcattttctac
cgtcaatctgatgtaccacaaacagcagaattgtcttggtatttgagttgtttctttccg
tttcagcgattaacattagcacattctttcaaagataaagctgatcgattagaagatgta
aatgctggattatttacgtatccaatgttaatggcggccgatattttattgtatgatgcc
aatattgtaccagtaggaaaagaccaattacaacatatcgaaattaccagagatgttgct
tcgcgttttaaccatcaaatgggagaaacctttgtattaccagaaggaaaaacaagtgaa
gaaaccatgtatgttcctggaacaaatggtggaaaaatgagtaaatcggcaaacaatttt
atcaatatctttttagatgataaagcgcttcgtaaacaaattatgggaattcaaaccgat
agtacaccactagaggaaccaaaaaacccagacacttgtaattgttttgcattatataaa
atattagcaactcctgaacaaactgaagtaatgagagctaattatttaggtggaaattat
ggctatggtcatgccaaacaagaattgtttgaattgattttagacaagtttggtccaatt
agagaaaaatacaattactacatcaacaacttagaagaagtagatcgtttgttgttagaa
ggcgctgcaaaagctggtgaagtagcaaatggtgttttgaaaagagtaagagagaagttg
ggatattaa
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