Erigeron canadensis (horseweed): 122603508
Help
Entry
122603508 CDS
T07610
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122603508
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122603508
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122603508
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
122603508
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122603508
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122603508
Prokaryotic type
122603508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
122603508
NCBI-ProteinID:
XP_043632164
LinkDB
All DBs
Position
6:5680471..5686907
Genome browser
AA seq
399 aa
AA seq
DB search
MENDKKTTDNEEDSQVVNPWEVSSTKKIDYDKLIDQFGCQRLDQSHVDRVKALTNRPPHV
FLRRNVFFAHRDFNEILDAYERGEKFYLYTGRGPSSESLHLGHLVPFMFTKYLQDAFKVP
LVIQLTDDEKCIWKNLTVEESKRLARENAKDIIACGFDVSRTFIFSDFNFVGGAFYENMI
RVGNCVTYNKVVGIFGFTGEDHITKVSFPPVQAVPSFPSSFPHLFSGKDNLRCLIPCAID
QDPYFRMTRDVAPRLGYNKPALIESLFFPALQGETGKMSASDANSAIYVTDTQKDIKNKV
NKYAFSGGQDSVENHRKYGANLEVDIPFKYLSFFLEDDEELEHIRTEYGSGRMLTGEIKK
KLIDVLSEIVERHRTARAAVTEEMVDAFMAVRPMPNMFN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgacaagaaaacaactgacaatgaagaagattctcaggtagtgaatccttgg
gaagtgtcgtcaaccaaaaagatcgattatgacaaattaatcgatcaatttggttgtcaa
agactcgatcaatctcatgttgaccgtgttaaagctctaactaatcgtcccccacatgtt
tttcttcgccgaaacgtgttttttgctcatagggacttcaatgagatattagatgcgtat
gaacgtggtgaaaaattctatttgtacacaggcagaggcccctcttctgaatcattgcat
ctggggcatcttgttcccttcatgtttacaaaatatctgcaggatgctttcaaagttccg
ctagtcattcaactaacggacgatgaaaagtgcatctggaaaaatcttacggtggaagaa
agcaagaggcttgctcgagaaaatgcgaaagatattattgcatgtggatttgatgtctca
aggacctttattttttcagattttaatttcgtaggcggggccttctatgagaacatgatt
agggttggaaactgtgtcacatacaacaaggttgttggcatatttggttttactggtgaa
gatcatatcacgaaagttagtttcccaccagtgcaggctgttccatcattccccagttca
tttccacacctgttttctggaaaagataatctccgttgcttgattccttgtgcaatcgat
caggacccttatttcaggatgacccgggatgttgctcctcggttaggctataacaagcct
gcattaatcgaatcattattttttccggcccttcagggagagacaggcaaaatgtccgcc
agtgatgctaattcagcaatatacgtgacagacacacagaaagatatcaagaacaaggtt
aataaatatgctttctctggggggcaagattctgttgagaatcatagaaagtatggagct
aaccttgaggtggatattccttttaaatacctcagtttcttcttggaggatgatgaggag
cttgaacatatcaggacagaatatggttcgggacgtatgttaacaggtgaaattaagaag
aaactaattgatgtattaagcgaaattgttgaaagacatcgtacggctagggcggcagta
accgaggagatggttgatgcttttatggcagtaagaccgatgcctaatatgtttaactga
DBGET
integrated database retrieval system
