Desulfosarcina widdelii: DSCW_52810
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Entry
DSCW_52810 CDS
T06303
Name
(GenBank) glycyl radical enzyme
KO
K07540
benzylsuccinate synthase [EC:
4.1.99.11
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00623
Toluene degradation
dwd01100
Metabolic pathways
dwd01120
Microbial metabolism in diverse environments
dwd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00623 Toluene degradation
DSCW_52810
Enzymes [BR:
dwd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.11 benzylsuccinate synthase
DSCW_52810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
BBO77864
UniProt:
A0A5K7ZHR9
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Position
complement(5683147..5685726)
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AA seq
859 aa
AA seq
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MARVAEAIEYKGKVIEFPPEYPEELNVPTEELCETLSRPSTERTKRLKARCRFKHTAAGE
FVDPNLKAGIERMRYFTESHKQTVGMPNAIRRAHALANLLNKCTLVLQEDEFIVGFNAEH
PDKIPLYPETSYMTVADYIQSRNCPEEKEEAIEYNEYWKDHSIQALGQRYFTQEELLQMY
QFTTMEPPAFANAYNSVCPPYETVLEDGLLKRIEIAEQNKQNAMNEMQSPAWNAPQRLPL
MEKIDNWDAMIIADKAVISWARRHGRLCKIVAENFETDPKRQEELIEIAGICHRMPAEPA
KGLRDAMQAKWFTYLISHSLENYASGYAHKEDKLLYPYYKTSVIDKSFQPMTYEDAVELV
ECERLKVSEHGCGKNRAYREAFPGSNDLFILTLGGVNVDGTDGCNDMTDAILDAAKNIRT
TEPSIGFRWNKIGREKTKRKVFECVRDGLGYPSIKNDEIAIEQLQKNFGATLEEARDWAL
QLCMSPGHVGRRKTQKARTEGGGSLLPAKMFEITLSDGYDWSHSDMQLGPKTGDPREFQT
FEELFEAFKTQFGYCSDLVWRAKDVTRHFQGHYCQLPFVSSLDDGCMEKGVDAMVLSELA
NPWHNCMTNIVACNSLIACKKLIYDDKKYTMDELIEALHANWEGYEEMHKDFKDAPKWGN
DDDYADEIVKRVYEEIFAGKFKEITNYSGAHPMPGGQAVGAYLFIGARTGPTPDGRYGGE
ACDDGGISPMAGTDTKGPTAVIKSVSKVDSETQKFNLLNQRLSVPLMRSTHGFDIWHAYM
KTWCDLKCDHVQFNCVSTEEMRAAQKEPEKHGDLIVRVAGFSARFVDVSTYGQNTIIARN
EQTFGPYDFDELGVEFADN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagttgcagaagcaattgaatacaaggggaaagtaattgaattcccgcccgaa
tatccggaagaactaaacgttcctacggaagagttgtgcgaaacgctcagtcggcccagc
actgagaggacgaagcgattaaaggctcggtgccgcttcaaacatacagccgccggtgaa
tttgtcgatccgaatcttaaagctggtattgaacggatgcgctactttaccgagtcccac
aagcaaaccgtggggatgcccaacgcaatccgtagggcgcatgcgctggcaaaccttctg
aacaagtgcacactggtgcttcaagaggatgaattcattgtcggcttcaacgcggagcat
ccggataaaatcccgctgtatcccgagacatcatacatgaccgtagcggattatatccaa
agccgaaactgtcccgaagaaaaggaagaagccattgaatacaacgaatattggaaagac
cacagcattcaggcgttgggtcaacgctattttacccaggaagagttgttgcagatgtac
caatttaccaccatggaaccgccggctttcgccaatgcctacaacagcgtatgcccgcct
tacgagaccgttctcgaagacggcttgctcaaacgaattgaaattgcggaacaaaacaag
caaaatgcaatgaatgaaatgcagtcgcccgcctggaacgcgccacaacggcttccacta
atggaaaaaatcgacaattgggacgcaatgatcatcgcagacaaggctgtgatctcatgg
gccagaaggcacggtcggctctgtaagatcgtagccgagaattttgagaccgatcccaag
cgtcaagaagaactgattgagatcgccggcatctgccaccgtatgcccgctgaaccggcg
aaaggattgagagacgccatgcaggcaaaatggtttacctacctgataagccattcactg
gaaaattatgccagcggatacgcccataaagaggataagctcctgtacccctattacaaa
acgagtgtgatcgacaaatccttccaacccatgacatacgaagatgcggttgaactcgtt
gagtgtgaaaggttgaaggtctccgagcatggttgcggtaaaaaccgggcttacagagag
gcctttccggggtcgaacgaccttttcattctgaccctcggtggggtgaatgttgatggc
acggatggatgcaacgacatgaccgacgcaatcttggatgccgccaaaaacatccgtacg
acggaaccttccataggatttcggtggaacaaaatcggcagggaaaaaaccaagcggaag
gtgtttgaatgcgtgcgggacggactgggctatccgtccataaagaacgatgaaattgcc
atagagcaacttcagaaaaatttcggtgccactctggaggaagccagggactgggccctc
cagctctgcatgtctccgggacatgtcgggcgcagaaagacccaaaaggccagaaccgag
ggcggcggatccctgttgcccgccaagatgtttgagattacgctcagcgacgggtatgac
tggtcacattcggacatgcagctgggacccaaaacgggagacccgagagagtttcagact
tttgaagaactttttgaggcgtttaaaactcagtttggttattgctcggatctggtatgg
agagccaaggacgtcacccgccattttcagggccattactgccagttgcctttcgtatcc
agccttgatgacgggtgtatggaaaagggcgtcgatgccatggtcttgagcgaactcgcc
aatccctggcacaactgcatgaccaatatcgttgcctgcaactctctcatcgcatgcaaa
aaattgatctatgacgacaagaaatacaccatggacgaattgatcgaagccctgcacgca
aactgggaaggttatgaggagatgcataaagacttcaaggatgcgccgaaatggggcaat
gacgatgattatgcggatgaaatagtaaaacgggtatacgaggagattttcgccggaaaa
ttcaaagaaatcaccaactattccggtgcccatcccatgccgggcggccaggccgttggc
gcctatctgttcatcggtgcccgcaccggcccgacgcccgacggaagatacggcggcgag
gcatgcgatgacggcggtatttcacccatggcgggcacggatacaaagggacccactgcg
gttatcaagtccgtatccaaagttgattcagaaacccaaaagtttaacttgctcaatcag
cgtctatcggttccgttgatgagaagtacacatggtttcgatatctggcatgcctacatg
aaaacatggtgcgatctgaagtgtgatcatgtccagttcaattgcgtcagtacggaagaa
atgagagccgcgcagaaagagcctgaaaaacacggagatctgatcgtacgggtcgctggt
ttcagcgcacggtttgtggatgtttccacctacggtcaaaatacaatcatcgcccgaaac
gagcagaccttcggcccctacgactttgacgaattgggtgttgaatttgccgataattaa
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