Deinococcus peraridilitoris: Deipe_2000
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Entry
Deipe_2000 CDS
T02381
Name
(GenBank) single stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03030
DNA replication
dpd03430
Mismatch repair
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deipe_2000
03430 Mismatch repair
Deipe_2000
03440 Homologous recombination
Deipe_2000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_2000
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_2000
03029 Mitochondrial biogenesis [BR:
dpd03029
]
Deipe_2000
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Deipe_2000
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Deipe_2000
TLS (translesion DNA synthesis) factors
Other SOS response factors
Deipe_2000
Mitochondrial biogenesis [BR:
dpd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Deipe_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
AFZ67497
UniProt:
L0A2S5
LinkDB
All DBs
Position
1999226..2000092
Genome browser
AA seq
288 aa
AA seq
DB search
MARGMNHVYFVGALARDPELRYTPSGVPVFEATVAGEDHVIGNDGRERRLPWYHRVSVLG
KPAEWISERNLKSGDIVMVEGSLEYSSWDAPEGGKRSMVRVKAQRIESVVSATETVQDAG
GGLRLGGGWNVVMLLGNLTRDPELRYTPAGDAVLGLGLAVNESWKDRNGQQQEKTHWIDV
TLWRELAEAAANLKKGDPLLVTGRLMNEAWTDKEGNKRNSTKVEATKVEVLTRGAGAGAS
AATPVAARGAMGNATSSARSVGTGSRSGGLDIDQGLDNFPPEEEDLPF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaggaatgaatcacgtttattttgttggtgcactcgcccgcgaccccgaactt
cgttacacccccagcggcgtgcccgtattcgaggccaccgtggcaggagaggaccacgtc
atcggcaacgatggccgtgaacgccgcttgccctggtatcaccgcgtcagcgtccttggc
aagcctgccgaatggatcagcgagcgcaacctcaagtccggcgacatcgtgatggtggaa
ggctccctggagtacagctcctgggacgcgcccgaaggcggcaagcgcagcatggtgcgc
gtcaaggcgcaacgcatcgaaagcgtggtttcggccacggaaaccgtgcaggacgcgggt
ggaggcctcaggctcggcggcggctggaacgtcgtcatgctgctcggcaacctcacccgt
gaccccgaactgcgctacacccccgctggagacgcggtgctgggcctcggcctcgccgtg
aacgaaagctggaaggatcgcaatggccagcagcaggaaaaaacccactggatcgacgtg
accctgtggcgtgaactggctgaggctgccgcgaacctcaaaaagggtgatcccctcctg
gtcaccggacgcctcatgaacgaggcctggaccgacaaggaaggcaacaagcgcaactcc
accaaagtagaagcgacgaaagtcgaagtcctgacccgaggcgcgggtgccggcgcatcc
gcagccaccccggtcgcagcccgtggggccatgggcaatgcgaccagcagtgccagaagt
gtgggcacggggtcccgttcgggcggcttggatattgatcaaggcctcgacaatttcccg
ccggaagaagaagacctgccgttctaa
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