Deinococcus deserti: Deide_00120
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Entry
Deide_00120 CDS
T00880
Symbol
ssb
Name
(GenBank) putative single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ddr
Deinococcus deserti
Pathway
ddr03030
DNA replication
ddr03430
Mismatch repair
ddr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deide_00120 (ssb)
03430 Mismatch repair
Deide_00120 (ssb)
03440 Homologous recombination
Deide_00120 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddr03032
]
Deide_00120 (ssb)
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_00120 (ssb)
03029 Mitochondrial biogenesis [BR:
ddr03029
]
Deide_00120 (ssb)
DNA replication proteins [BR:
ddr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Deide_00120 (ssb)
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Deide_00120 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
Deide_00120 (ssb)
Mitochondrial biogenesis [BR:
ddr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Deide_00120 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACO44807
UniProt:
C1CXK1
LinkDB
All DBs
Position
complement(11715..12608)
Genome browser
AA seq
297 aa
AA seq
DB search
MARGMNHVFLIGALARDPELRYTPSGTAVFEATVAGEDHLVGNDGRERKLPWYHRVSILG
KPAEWQAERNLKGGDAVLVEGSLEYSQWEAPEGGKRSMVRVKALRMEQLGTQPELVQDAG
GGVRMGRGMNEVVMIGNVTRDPELRYTPAGDAVLGIGLAVNETWNDRQGQRQEKTHWIDV
TLWRDLAESMKDLKKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGATAGQA
GYAASPAAPRQTTSSAARPQTGGSGPSRAATMGNRSGGLDIDQGLDDFPPEEEDLPF
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggccagaggcatgaaccacgtcttcctgatcggcgcactcgcccgtgaccctgaactg
cgctacacccccagcggcactgccgtcttcgaagccaccgtcgctggtgaagaccacctg
gttggcaacgatggacgcgagcgcaagctcccctggtaccaccgcgtgtctattcttggc
aaacctgccgagtggcaggccgaacgcaacctgaaaggcggagacgccgtgctggttgag
ggcagcctggaatacagccagtgggaagcccctgaaggtggcaaacgcagcatggtccgt
gttaaggcgctgcgtatggaacagctcggtacccagcctgagcttgtgcaggacgccgga
ggcggcgtacgcatgggccgcggcatgaacgaggtggtcatgatcgggaacgtcacgcgt
gaccccgaactgcgctacacccccgccggcgacgccgtgctcgggatcggcctggccgtg
aacgagacctggaatgaccgtcagggccagcgccaggaaaaaacccactggatcgatgtg
accctgtggcgtgacctggctgaaagcatgaaggacctcaaaaaaggtgaccccgtgctg
gtgcagggaaggctcgtcaacgaggcgtggaccgaccgcgacggtaacaagcgcaacagc
accaaagtagaagcgacgagagtcgaagccctgtcccgaggcgcgaccgctggccaagcc
ggctacgcagcctcccccgcggcacctcgtcagaccacgagcagtgcagcgcgccctcag
actggtggctccggccccagccgggcggcgaccatggggaaccgttcgggcgggttagat
attgatcaaggtctcgacgacttcccacccgaggaagaggacctgccgttttaa
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