Cuculus canorus (common cuckoo): 104069031
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Entry
104069031 CDS
T08597
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4 isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104069031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104069031
Ion channels [BR:
cuca04040
]
Ligand-gated channels
GABA-A
104069031
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
104069031
NCBI-ProteinID:
XP_009570295
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Position
10:10905626..10980461
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AA seq
488 aa
AA seq
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MWTFQADRLSGIVSALAALCLACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPV
TVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDT
YFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIES
YGYTVDDIVFFWQGNDSAVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIP
YVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGPRQQKKQSERISKANNERHRYEEKRV
REQVDPYGNILLSTLEMNNELLATDMMSSVGDSRNSVMSFEGSGIQFRKQLASRDGFGHH
PTLDRHVPLTHHAAARNRANCRLRRRSSKLKLKIPDLTDVSTIDKWSRIIFPITFGFFNL
VYWLYYVN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatttcaggcagacagattgagtggaattgtatctgctttagcagctctttgt
ctcgcctgctgtgcgcaaagcccatccactgggaatatttctgtggtgaaagagattgtg
gacaaactgctgaagggctatgacgtccgcctcaggcctgactttggaggtaaccctgtc
acagtgggaatgagcatccacatctccagcattgaccagatctctgaagttaacatggac
tacaccatcaccatgtacttccagcagagctggcgggacaagcgcctggcgtacaatgac
cttcctcttaacctaaccttggacaaccgggtggctgaccagttgtggctgcctgacacc
tatttcctcaatgacaagaagtcctttctgcatggggtgacagtgaagaatcgcatgatt
cggctccatcctgatgggactgtcctgtatggcctgaggatcaccaccacagccgcttgc
atgatggacctgcggaggtaccccctggaccagcagaactgcacgttggagattgaaagc
tatggttacacagttgatgacattgtcttcttctggcaaggaaatgattctgctgtcacg
gggatggaggtgctagaactgccccagttcaccattattgagcagaggctggtcagcagg
gaagtggtctttaccaccggttcatatctgcgtttatccttgagtttccggattaagagg
aacattggttacttcatcctgcagacttacatgccatctattctcatcaccatcctgtcc
tgggtctccttctggatcaattatgatgcttctgctgcacgagtggcactgggggtcacc
acggtacttacaatgactaccatcaacacccatctgcgggagactctccccaagatccct
tacgtcaaggctattgatgtttatctcatgggctgcttcgtctttgtgttcctggcactc
ctggagtatgcttttgtcaactacatattcttcgggcgaggccctcggcagcaaaagaag
cagagtgaacggatcagcaaggccaacaatgaacgccaccgttatgaggagaagagggtg
agagagcaggttgacccttatggtaacatcctcctcagtactctggagatgaacaacgag
ctgctggccacagacatgatgagcagtgttggcgactctcgaaactctgtcatgtccttt
gaaggctcaggaatccagttccgaaagcagctggcctctcgggatggatttggtcaccac
ccaaccctggaccggcacgtcccgctgacccaccatgccgcggcccgcaaccgtgctaac
tgccgtctccgccggcggtcatctaagctgaagctcaaaatcccagacctgacagatgtc
agcaccattgacaagtggtcacgaatcatttttccaatcacctttggattcttcaacctt
gtttactggttgtactatgtaaattga
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