Cuculus canorus (common cuckoo): 104057740
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Entry
104057740 CDS
T08597
Symbol
WARS1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104057740 (WARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cuca01007
]
104057740 (WARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104057740 (WARS1)
Enzymes [BR:
cuca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
104057740 (WARS1)
Amino acid related enzymes [BR:
cuca01007
]
Aminoacyl-tRNA synthetase
Class I (G)
104057740 (WARS1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104057740 (WARS1)
Prokaryotic type
104057740 (WARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
104057740
NCBI-ProteinID:
XP_053924174
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All DBs
Position
5:complement(28541504..28566139)
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AA seq
473 aa
AA seq
DB search
MADSPNCDLKSLTPLQLFEKVTEQGEKVRALKAGKAPKDEIDVAVRMLLSLKQSYKIATG
QDYQAGLPPRDLVLINNSTTKEDDEDFVDPWTVQTSNAKGVDYDKLIVRFGSSKIDTDLI
NRIERAIGQKPHRFLRRGIFFSHRDMDQILDAYENKKSFYLYTGRGPSSQAMHVGHLIPF
IFTKWLQEVFDVPLVIQLTDDEKYLWKDLTIEKAYEYARENAKDIIACGFDINKTFIFSD
LDYLGTSTGFYKNIVRVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPQIF
NGKENIQCLIPCAIDQDPYFRMTRDVAPRIGQPKPALLHSIFFPALQGAQTKMSASDPNS
SIFLTDTPKQIKTKINKHAFSGGRDTIEEHRKYGGNCDVDVSFMYLTFFLEDDDKLEQLK
QAYTSGELLTGELKKVLIETLQPLIAAHQERRKQVTDEMVKQFMTPRKLAFEF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagtccgaactgtgatttgaaatctctgactccacttcagctgtttgaaaaa
gtaactgaacaaggagagaaagtcagagcattgaaagcaggaaaagcaccaaaggatgaa
attgatgtagcagtgaggatgctgttatcattaaaacagtcatataaaatagcaacaggg
caggattaccaggcaggcttgcctccaagagatcttgtattaataaacaacagtacaact
aaagaagacgatgaggattttgtggacccctggactgtgcagacatcaaatgctaaaggc
gtggattacgacaaactcatagttcggtttggcagcagtaaaattgacacagatctgatc
aatcgaatagaaagagctattgggcaaaaacctcaccgctttctgcgtagaggaatcttt
ttttctcacagagatatggaccaaatccttgatgcttatgaaaataagaagtccttttac
ctttatacaggcagagggccgtcctctcaggcaatgcatgttggtcatcttatcccattt
atatttacaaagtggctgcaagaagtatttgatgttcccttagttatacagttaactgat
gatgagaaatacctttggaaggacctgacaattgaaaaagcatacgagtatgctagagaa
aatgcaaaagacatcattgcatgtggttttgacatcaataaaacctttatattttctgat
ttagactatttagggacaagtactggattctacaaaaacattgtcagagttcagaagcat
gttacatttaaccaagtgaaaggaatctttggatttacagacagtgattgcattggaaag
atcagctttcctgctattcaagctgctccatccttcagttcatcatttccacaaattttc
aatggcaaggagaacattcagtgtcttatcccatgtgctattgatcaagatccttatttt
agaatgacccgagatgtagcacctagaattggacaacctaaaccagccttactgcactca
atcttcttcccagccttgcaaggagcacagacgaaaatgagtgctagtgacccaaactcc
tccatcttcctcactgatacacccaaacaaattaagacaaagattaacaagcatgccttc
tcaggaggcagagatactattgaagagcacaggaagtacggaggtaactgtgacgttgat
gtgtcttttatgtacctgactttcttcctagaagatgatgacaagctcgaacaactgaag
caggcgtacacaagtggggaactgctcacgggggagttgaagaaggttcttattgaaaca
ttgcagcccttgatagcagctcatcaagagagaaggaaacaggttacagatgaaatggtg
aagcaatttatgactccgcggaagctggcttttgaattttga
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