Columba livia (rock pigeon): 102087575
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Entry
102087575 CDS
T02912
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03030
DNA replication
clv03410
Base excision repair
clv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102087575 (POLE)
03410 Base excision repair
102087575 (POLE)
03420 Nucleotide excision repair
102087575 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clv03032
]
102087575 (POLE)
03400 DNA repair and recombination proteins [BR:
clv03400
]
102087575 (POLE)
Enzymes [BR:
clv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102087575 (POLE)
DNA replication proteins [BR:
clv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102087575 (POLE)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102087575 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
102087575
NCBI-ProteinID:
XP_021143844
LinkDB
All DBs
Position
Unknown
AA seq
2206 aa
AA seq
DB search
MQLGLDRVAQPVCLVGARTEVLDEDRRAGGAVDYYFIQEDGSRFKVALPYKPYFYIATHK
GCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEI
SPAVRKNKERDQASDVYTSMLSSALSGGSLSTDEEGASRKVASQMDNIVDMREYDVPYHV
RVSIDLKIHVAHWYNVRYRGSTYPPEITRQDDLVERPDPVVLAFDIETTKLPLKFPDAET
DQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEH
VQETKPTVIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKATQCIHMDCLRW
VKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMY
MKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTED
GHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEEGLPL
DQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEAT
CAACDFNKPGTNCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLSPEGAPRAFHEL
SREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKG
LHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSME
MAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTI
SYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGK
KLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVA
DYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVK
DAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDW
DYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSE
GKRQVLANQPPEGTPSSHIGDIEDFGAAKTLQPPVPITNKRKRVPAAEESQQMSQYLELS
QSWREILGPPPPLGTTKVGEADGTRDDLELVHPSSLGAARRKLWVSCNPLHSHGSGLRGE
IRLEDGGAAAGGGVVRDALSKGLNSYLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIG
SDLHCIRLSIPRVFYVNQRIPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHIN
EINADLSAPDIEGVYETQVPLLLRALIHLGCVCMVSRQLVRHLAGREAETFDIEHLEMRS
LAQFTYLEPGSIRHIYLYHSSQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSV
ERSTLLEKAGEELLPPDKHTFEVRAETDPKAVYRAIQRLLLGYKHAARRMIRHYLNLDTC
LSQAFEMSRYYHIPVGNLPEDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDN
RLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGCSSMSISFDVIQ
QASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVVSWVKEITQYRNVYADNQVIHFY
RWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIED
AISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVDSRVHYGEKETSK
RQVSQEEDSEEEEEEEEEVAVGEEEEEGELNVEDLLENNWNIAQFLPQAASCQSYFLMIV
SAYIVAVYHSMKEELRRNAPGNTPVKRRCTSQVSQEVLGEMGAMPGMITFSQDYVANELT
QSFFTITQKIQKKMSGSRNATEPSDMFPVLPGSYLPLNNPALEFIKYVCKVLSLDANITN
QVNKLRRDLLRLIEVGEFSEEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPALSQDGS
VLPSWVCSNCQAQYDSDAIEAALVEALQKKLMAFVLQDLVCKKCHGVKETHMPVYCSCAG
DFALTISSQTFMEHINVFQNIARHYGMSYLLETIEWLLRTNPQLRQ
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggggctggaccgtgtggcacagcctgtgtgtctggtgggggcgagaacggag
gtgctggacgaggaccggcgggcggggggcgctgtggattactacttcatccaggaggac
gggagccgtttcaaggtggccctgccctacaagccctacttctacatcgccacccacaag
ggctgcgagcgagaagtgtcctcattcctctccaagaagttccaagggaagattgcgaag
ctggaaactgtccctaaagaagacttagacctgccaaaccacttggtgggcctgaagagg
aactacatcaagctgtccttcaacacggtggaggacttggtgaaggtgcggaaggagatc
tctcctgctgtgaggaaaaacaaagagcgagaccaggcgagcgatgtctacacgtccatg
ctgtcgagcgctctgagcggaggcagcctgagcacggacgaggaaggcgcctccagaaag
gttgccagccagatggacaacatcgtggatatgcgggagtacgacgttccctaccatgtt
cgcgtctccattgacctgaagatccacgtggcccactggtacaacgtgcgataccggggc
agcacctacccccccgaaatcacccgccaagacgacctggtggagcggccggatcctgtc
gttctcgcctttgacattgaaactacaaaactccctttgaagtttcccgatgctgagaca
gaccagatcatgatgatctcctacatgattgacgggcagggctacctgatcacaaacagg
gagatcgtctctgaggatattgaagactttgagtttactcccaagccggagtatgagggt
ccattttgtgtctttaatgaaccagatgaagctcatttaatccagaggtggtttgaacat
gtccaggaaaccaaacccactgtcattgtcacatacaacggagacttctttgactggccc
tttgtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcag
aaggacagccagggagagtacaaagcaacccagtgcatccatatggactgtctaaggtgg
gtgaagagagacagttacctccccgtgggaagtcataacctgaaagcagcggctaaagca
aaactgggttacgacccagtggagctggaccctgaagagatgtgccggatggctacggag
gagcctcagaccctggccacctattcagtgtccgacgcagttgctacctattacatgtat
atgaagtacgtgcatcctttcattttcgccttgtgcaccatcattcccatggagcctgac
gaggtgttaagaaaaggatctgggacgctctgtgaggcgctgctgatggttcaggcctat
catgccaacatcatcttccccaacaagcaggagcaggaattcaataaacttacagaagat
ggccacgtgctggactcggagacgtacgtgggaggccacgtggaagcgctggaatctggg
gttttccgcagtgacatcccctgccgcttcaaaatgaatcctgcggccttcgactttctg
gtgcagcacgtggagaagacgctgcggcacgccatcgaggaggaggagggtttgccgctg
gatcaagtcaccaacttccaggaggtttgtgatgaaatcaaggtcaaactgaattccctg
aaggatgttccaaacagaattgagtgtccccttatctaccacctagacgtgggggccatg
taccccaacatcattctgaccaacaggttgcagccctcagccatggtggacgaggccacg
tgcgcggcctgcgacttcaacaagccgggtaccaactgccagcgccggatgacttggcag
tggaggggagagttcatgcccgccagccgcagcgagtatcaccgcatccagcagcagctg
gagtcggagaagttccctccgctgtcccccgagggagcaccccgagccttccacgagctc
tccagggaagaacaggccaagtatgagaaaaagcggctggcagattactgccgcaaggcg
tacaagaagatccacgtcaccaaggtggaggagcgagtcaccaccatctgccagcgagag
aactctttctatgtggacacagtgcgagctttcagggaccgccgctacgagttcaagggg
ctgcacaaggtgtggaagaagaagttatctgcagcggtggagacaggagatgcctctgaa
gtgaagcgctgtaagaacatggaaatcctgtatgactccctgcagctggcccacaagtgc
atcctcaactctttctatggctacgtcatgcggaaaggagctcgctggtactccatggag
atggctggcatcgtctgcttcacgggagcaaatatcatcacccaggccagggaactgatc
gaacagattgggagacctctggaactggataccgatgggatttggtgtgtcctccccaac
agcttcccggagaactttgtcatcaagtcaaccaatgccaagaagccaaaggtgacaatc
tcctacccaggtgccatgctcaacatcctggtgaaggaaggcttcacgaatgaccagtac
caggaactgcaggacccagcctctctcacctatgtcacacgctcggagaacagcatcttt
tttgaggtggatggaccatacctggccatgatcctcccagcttccaaggaggagggcaaa
aagctgaagaaaaggtacgcagtgttcaacgaggacgggtctctggccgagctgaaggga
tttgaggtgaagcgccggggagagctgcagctggtgaagatattccagtcttcggtattt
gaagcctttctgaaaggcagcaccctggaggaggtctacgcttctgtggccaaagtggcc
gattactggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgttt
gagctgatctcggagaaccggtccatgtcgcgcaagttggaggactatggggagcagaag
tccacctccatcagcactgccaagcgcctggcagagtttctgggggaccagatggtgaag
gatgcagggctgagctgccggttcatcatatccaagaaaccagaggggtctccggtcact
gagagggccatccccctcgccatcttccaagccgagcccagcgtgcgcaaacactacctt
cgaaaatggctgaagagcccctctctacaggacttcaacatccgcgcgatcctggactgg
gactactacattgagagactgggcagcaccatccagaaaatcatcaccattcccgcagcc
ctgcagcaggtaaagaacccagtgccgcgggtccggcacccagactggctccacaagaaa
ctccttgagaagaatgatgtgtacaaacagaaaaaaatcaatgagctcttcacttcagaa
ggcaagagacaggtcctcgccaaccagcccccagagggcacacccagctcacacattggt
gacatagaggactttggggctgccaaaacccttcagccaccagttcccatcacaaataag
cggaagcgagtccctgcagcagaggaaagccaacagatgtcccagtacctggagctatcc
caatcctggcgagagatcctgggtccacctccgcccttgggcaccaccaaggtgggtgaa
gcagacgggacaagagatgacctggagcttgtccacccaagcagcttgggcgctgccagg
aggaagctgtgggtctcctgcaaccctttgcacagccatggctctgggctacgaggagaa
atacgtctggaggacggtggagcagcagctggtggaggagtggtccgcgatgccctctcc
aaagggctgaacagctacctgcgcaggacagcgcgcagcatcctggacttgccctggcag
attgtgcagatcgccgagaccagccagcctgggctcttcaggctgtgggcagtgattggg
agcgacctgcactgcatcaggctgagcatcccccgggtcttctatgtcaaccagcgcatc
ccgaagccggaggagggagcagcctacaggaaggtcaacaggatcctgccccgctcgaac
ttggtttacaacctgtatgagtactcagtccctgaagacatgtaccaagagcacatcaat
gaaatcaatgcggacctctctgctccagacatcgagggagtgtatgagacgcaggtgccg
ctgcttctccgtgccctgatccacctgggctgcgtgtgcatggtcagcagacagcttgtc
aggcacctggcggggagagaggccgaaacctttgacattgagcacctggagatgcgctcg
ctggcccagttcacttacctggagccaggaagcattcgccacatctacctctaccacagc
tcccagggcagcaaggctctcttgggcctcttcatcccatcgcagcgcaaagctgctgtc
tttgtgctggacaaggtacgcagcaaccagatgccaaatctcaccaccctcttctcggtg
gagcgcagcacgctgctggaaaaggcaggtgaagagctgctgcctccggacaagcacaca
tttgaggtgcgcgctgagaccgaccccaaggccgtctacagagccatccagcgcctgctg
ctgggatacaagcatgccgcccgccgcatgatccgccactacctcaacctggacacctgc
ctgtcccaggcgttcgagatgagcaggtactaccacatccctgttgggaacctccccgag
gacatctccacctttggctctgacctgttcttctcacgccacctccgtcgtcacaaccac
ttgctgtggctctcacccacggcccgcccagacctggggggtaaggaggctgatgacaac
cgcctagtcatggagtttgatgagagggcctctgtggagataaacaaccctggctgctac
tccacagtgtgtctggagctggacatccagagcctggctgttaacaccgtgttgcagtcc
caccacataaacgacatggaaggatgctccagcatgagcatcagctttgacgtgattcag
caggcgtccctagaagacatggtgacagggaaccaagctgccaacatcccggccagctac
gatgaaactgccctctgctccaacactttcaggatcctgaagagcatggtggtgagctgg
gtgaaggagatcacgcagtatcgcaatgtctacgcagacaaccaagtcattcacttttac
cgctggctccgctctccttcctccctgctctatgacccggcactgcaccgcacgctccac
aacatgatgaagaagcttttcctgcagctggtggctgagttcaagcgcctaggctcttcg
gtggtgtatgccaacttcaaccggatcatcctgtgcaccaagaagcggcgcattgaggac
gccatcagctacatggagtacatcatcaacagcatccattccaaggagatattccactct
ctgaccatctccttctcccgctgctgggagtttctgctctggatggatccagcaaattat
ggaggtatcaagggaaaagtggattctcgtgtccactatggggagaaggagaccagcaag
agacaagtgtcacaggaggaggacagcgaggaggaggaggaggaggaggaggaggtggcc
gtgggggaagaagaggaggaaggggagctgaacgtggaggacctgctggagaacaactgg
aacattgcacagttcctgccccaggccgcctcctgccagagctacttcttgatgatcgtg
tcagcctatatcgtggccgtgtaccacagcatgaaggaggagctgcggcgcaacgccccc
gggaacacccctgtcaagaggagatgcaccagccaggtgtcccaggaggtgctgggggag
atgggggctatgcccggcatgatcaccttctcccaggattatgtggccaatgagctcacc
cagagcttcttcaccatcacccagaagatccagaagaagatgtctggttctcgtaatgcc
actgagccttcagacatgttcccagtgctgcccggctcctacttgccactcaacaacccg
gctttggagttcatcaaatatgtttgcaaggttctgtctctggatgccaacataacgaac
caggtgaacaaactgcgcagggacctgctgcgcctcattgaggtgggcgagttctcggaa
gaagcccagtttcgggacccttgccgttcctacgtgctccccgaagtcatctgcaggaac
tgcaacttctgcagggacctggacctctgcaaggaccctgccctctcccaggacgggtcg
gtgctgcccagctgggtctgctccaactgccaagcacagtatgactccgatgccattgaa
gcggctctggtggaagccctgcagaagaagctgatggcctttgtgctgcaggacctggtg
tgcaagaagtgtcatggtgtgaaggagacacacatgcctgtgtactgcagctgtgctgga
gactttgccctcaccatctcctcccagacgttcatggagcacatcaacgtcttccagaac
atcgcccggcactacggcatgtcctacctgctggaaaccattgagtggctgctgcgcacc
aacccgcagctccggcagtga
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integrated database retrieval system
