Collimonas fungivorans: CFU_0475
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Entry
CFU_0475 CDS
T01583
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
cfu
Collimonas fungivorans
Pathway
cfu03030
DNA replication
cfu03430
Mismatch repair
cfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFU_0475 (ssb)
03430 Mismatch repair
CFU_0475 (ssb)
03440 Homologous recombination
CFU_0475 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfu03032
]
CFU_0475 (ssb)
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_0475 (ssb)
03029 Mitochondrial biogenesis [BR:
cfu03029
]
CFU_0475 (ssb)
DNA replication proteins [BR:
cfu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFU_0475 (ssb)
DNA repair and recombination proteins [BR:
cfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CFU_0475 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
CFU_0475 (ssb)
Mitochondrial biogenesis [BR:
cfu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CFU_0475 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Lyase_8_N
DUF5342
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEK60312
UniProt:
G0AGI2
LinkDB
All DBs
Position
574360..574932
Genome browser
AA seq
190 aa
AA seq
DB search
MAAQPPPRQHDFQGIFSRYSYLGEHHMASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVA
TTESWKDKNSGEKKELTEWHRITFYRKLAEIAGQYLKKGSQIYIEGRLQTRKWQDKDGAE
RYTTEIIADTMQMLGSRQGAGGSAPMDGGDYNSAPPARQQNTSAPAAPARQAPASRPAPN
FSDMDDDIPF
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcacagccaccaccgcggcagcatgatttccaaggcattttttcaagatattcg
tatttaggagagcatcacatggcatcggtcaataaagtcatcatcgtcggcaatctcggc
cgcgacccggaaacacgctacatgccgaacggcgaagccgtcaccaacattgccgtcgcc
accacggagagctggaaagacaagaacagcggtgagaaaaaagaattaaccgagtggcac
cgcatcaccttctatcgcaagctggcggagatcgccggccagtacctgaaaaaaggttcg
cagatctacatcgaaggccgcctgcagacgcgcaagtggcaagacaaggatggcgccgag
cgctacaccaccgaaatcatcgccgacaccatgcagatgctgggcagccgccagggtgcg
ggcggcagtgcgcctatggatggtggcgactacaacagcgcgccgccggcacgccagcaa
aacaccagcgccccggctgctccggcccgccaggcgccagcttcccggccagcaccgaat
ttctcggatatggatgacgatattccgttctag
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