Chondrus crispus (carragheen): CHC_T00010058001
Help
Entry
CHC_T00010058001 CDS
T02916
Name
(RefSeq) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHC_T00010058001
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccp01007
]
CHC_T00010058001
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccp03016
]
CHC_T00010058001
Enzymes [BR:
ccp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
CHC_T00010058001
Amino acid related enzymes [BR:
ccp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CHC_T00010058001
Transfer RNA biogenesis [BR:
ccp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHC_T00010058001
Prokaryotic type
CHC_T00010058001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
17324281
NCBI-ProteinID:
XP_005716564
UniProt:
R7QH44
LinkDB
All DBs
AA seq
407 aa
AA seq
DB search
MADLSTPPDVPATNDDQAPAPIVTPWEVSGIIDYDKLISQFGSRPISPELLARFEALTGH
RPHLFLRRGIFFSHRDLEALLNNYEAGKKFYLYTGRGPSSTALHLGHLVPFIFTAYLQKV
FNVPCVIQLTDDEKFLFAKQQKGDKPPPPIEHFMGLARENAKDIIAVGFDPAKTFIFSDT
SYIASLYLNVLRIQRITTYNQARAIFGFTDSDNIGKHAFPAVQAAPSFSTSFPVVLGGAV
DIPCLIPCAIDQDPYFRLTRDAAPRLNYLKPALIHSKFFPALQGDNTKMSSSLAESAIFL
DDTPKKIKTKVNKYAFSGGRETVEEHRRLGGNVDVDISYRYLTFFLEDDEKLEHIRAAYS
SGEMLSGEIKAELIKVLQPIVANHQTRRSEVSDQVLDQFFAIRPLEF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctcagtacgccacctgatgttcccgccacaaatgatgaccaagcccccgcc
cctattgtcaccccgtgggaagtatcaggcatcatcgactacgacaagttgatatcccaa
ttcggttcccgtcccatctccccggaacttcttgcccgcttcgaagccctcaccggccac
cgtcctcatctctttctgcgacgaggtatcttcttctcccatcgcgatctcgaggccctc
ctcaacaactacgaagcaggcaagaaattctacctctacactggccgtgggccctcgtcc
actgccctccatctcggccatcttgttcctttcatcttcacagcttatctgcaaaaagtt
ttcaacgttccgtgcgtcattcagcttaccgatgacgaaaagtttctcttcgccaagcaa
cagaagggcgataaaccaccaccaccgatcgagcattttatgggcctcgctcgcgagaac
gcaaaagacatcatcgctgttggtttcgatcccgcaaagacctttatcttctcggacacc
tcctacatcgcctcgctttatctaaacgtattgcgcatccagcgcattaccacatacaat
caggcccgcgccatcttcggctttacggactcggataacatcggcaaacacgccttcccg
gccgtccaggctgcgccgtcattctctacaagtttccctgtcgtccttggcggtgccgtc
gatattccgtgtctcattccatgtgctattgaccaggacccatattttagactcacgcga
gacgcagcaccgaggctcaactacctcaaaccggcactcattcactcaaagttcttcccg
gcgcttcaaggtgataatactaaaatgtcttcctctcttgcagaatctgctatcttcctg
gacgatacgcccaaaaagatcaagacaaaggtcaacaagtatgccttctcgggaggcagg
gagactgtggaggagcatcgacgactcggagggaacgtcgacgtagacatttcttaccga
tacctaacgtttttcttggaggatgatgagaaacttgagcacatccgggctgcttactcg
tccggtgaaatgctgtctggggaaatcaaggcagagctcatcaaggtgttgcaacctatc
gttgccaaccatcagactagacgttctgaagtctcagatcaagttttagatcagtttttc
gccatccggccattagaattttaa
DBGET
integrated database retrieval system
