Coregonus clupeaformis (lake whitefish): 121539013
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Entry
121539013 CDS
T08357
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic-like
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121539013
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121539013
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121539013
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
121539013
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
121539013
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121539013
Prokaryotic type
121539013
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
121539013
NCBI-ProteinID:
XP_041703120
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All DBs
Position
21:6818325..6839310
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AA seq
473 aa
AA seq
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MTDCLGDGAGDMTPMDLYEKLTLQGETVRTLKTEKAAKADIDAALQLLLKLKVDYKQVTG
QDYKAGCPPSECSVSQDNGPAADGEDMVDPWNVSTTSAKGVDYDKLIVRFGSSKIDQELV
DRIERVSGQEAHRFLRRGIFFSHRDMHQVLDAYEKNKSFYLYTGRGPSSEAMHVGHLIPF
IFTKWLQDTFDIPLVIQLTDDEKYLWKDLSLEDCHRYAVENAKDIIACGFDVNKTFIFSD
LDYMGASPDFYRNVVKIQKHVTFNQVKGIFGFGDSDCIGKIAFPAIQAAPSFSNSFPQIF
KGRKDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDANS
SIFLTDTPKQIKNKVNKHAFSGGKDTVEEHRKYGGNPDVDVSFMYLTFFLEDDEQLEKIR
QDYASGALLTGELKKSLIETLQPMITSHQERRKQVTDETVKQFMTPRPLDFNF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacagactgtctgggagacggggctggggatatgaccccaatggacctatatgagaaa
ctaacattacaaggagagacagtccgaactctgaaaacagaaaaggctgctaaagctgat
attgatgctgctctacagttgctgctgaagctcaaagtggactacaagcaggtaacaggt
caggactacaaggctggatgtccaccctcggaatgctctgtttcacaagacaatgggcca
gcagcagatggggaggacatggtcgacccctggaacgtctccaccaccagcgctaaagga
gtggactacgacaagctgatagtgaggtttggcagtagcaagattgaccaagagctggtg
gacagaatagagagagtctcgggacaggaggcacaccggtttttacgccgaggaatcttc
ttctctcacagagatatgcaccaggttctggacgcgtatgagaagaacaagtctttctac
ctctacacgggcagagggccctcctcagaggccatgcacgtgggccacctcatacctttc
atcttcacaaagtggctgcaggacacgtttgacatcccgctggtgatccagctgacggac
gatgagaagtacctgtggaaggacctgtccctggaggactgtcaccgctacgccgtggag
aacgccaaggacatcatcgcctgtggcttcgacgtcaacaagaccttcatcttctctgac
ctggactacatgggggcgtccccagacttctacaggaatgtggtgaaaatacagaagcat
gtgactttcaaccaggtcaaaggcatcttcggatttggcgacagtgactgcatcggaaag
atcgccttccctgccatccaggccgcgccgtcgttcagtaactctttccctcagatcttc
aagggcagaaaagacatccagtgtctcattccctgtgccatagaccaggacccttacttc
cggatgacccgggatgtggcccccaggatcggctaccccaagcctgccctgttgcactct
accttcttccccgcgctgcagggggcccagaccaagatgtccgccagcgatgccaactcc
tccatcttcctcacagacacgcccaagcagatcaaaaataaggtgaacaagcacgccttc
tccgggggaaaggacacggtagaggagcaccggaaatatggcggcaaccccgatgtggac
gtgtcctttatgtacctgaccttcttcctggaggacgatgagcagctggagaaaatccga
caggactacgccagtggagcgctgctaaccggtgagctgaagaagagtctgatagagacc
ctgcagccaatgatcacatcccatcaggagagacgcaagcaggtcacagacgagaccgtc
aagcagttcatgaccccgagacctctagatttcaatttctag
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