Caballeronia sp. SBC2: SBC2_53660
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Entry
SBC2_53660 CDS
T06459
Symbol
pucD_2
Name
(GenBank) putative xanthine dehydrogenase subunit D
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00230
Purine metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01232
Nucleotide metabolism
Module
caba_M00546
Purine degradation, xanthine => urea
caba_M00958
Adenine ribonucleotide degradation, AMP => Urate
caba_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SBC2_53660 (pucD_2)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
SBC2_53660 (pucD_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
STAS_2
Ead_Ea22
DUF745
ABATE
Motif
Other DBs
NCBI-ProteinID:
QIE27296
LinkDB
All DBs
Position
pSBC2-1:complement(1882023..1884410)
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AA seq
795 aa
AA seq
DB search
MNQQAEPFLRDMKEAKDLLEADFTQVHVSRPHESAHLHVSGRASYTDDIPVVAGTLHAAL
GLSAKAHAKIVSMSFDAVRAMPGVVAVLTAADIPGVNDVGPIIHGDDPILADGIVQFVGQ
PMFIVVAMSHDIARRAVRRAEVVYEELPAILTPQQARAANSHVLPPMKLARGDAGSKIAL
AAHRETGEMLLGGQEQFYLEGQISYAVPKDDDGMHVWCSTQHPSEMQHMVAHMLNVASHN
VLVECRRMGGGFGGKESQSGLFACCAALAAWKLLCPVKLRPDRDDDMMITGKRHDFHYTY
EVGYDDTGLIDGVSVDMTSRCGFSADLSGPVMTRALCHFDNAYWLPHVSIDGFCGKTNTQ
SNTAFRGFGGPQGAFAIEYIVDNIARSVGLDSLDVRRRNLYGKTEQNVTPYGQAVEDNVI
HELLDELEATSNYRARREAVREFNANNDVLKKGLALTPVKFGIAFNVTHFNQAGALVHIY
TDGSVLVNHGGTEMGQGLNTKVAQVVAHELGIRFNRVRVTATDTSKVANTSATAASTGSD
LNGKAAQDAARQLRERLAALAAEHYGAGQVDARDVRFVDDRIVVGDKAIPFDEVIMQAYR
ARVQLWSDGFYKTPKLYWDQGKMQGRPFSYYSYGAAVSEVVIDTLTGEMRVLRADALHDV
GASLNPALDVGQVEGGFIQGMGWLTTEELWWNAGGKLMTHAPSTYKIPTVNDCPPVFDVR
LFKNRNAEDSIHRSKAVGEPPLLLPFSVFFAIRDAVASVGNNTVNPPLNAPATSEEILKA
VRAVRAAVVATAAAH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaagccgaaccgttcctgagggacatgaaggaagcaaaggaccttctcgaa
gcagacttcacacaggtccacgtttcgcgtccgcatgaatccgcgcatctgcacgtcagc
ggccgcgcgagctacaccgacgacattccggtagtcgccggcacgttgcacgccgccctc
ggattgtcggcgaaggcgcacgcaaagatcgtatcgatgtcgttcgatgccgtgcgcgcg
atgcctggcgttgttgccgtcctgactgcggccgacatccctggcgtgaacgatgtcggc
cccatcattcacggtgacgacccgatcctcgccgatggcattgtgcagttcgtcggtcag
ccgatgttcattgtcgtcgcgatgtcgcatgacattgcccgtcgcgccgtgcgccgtgcg
gaggtcgtgtatgaagagttaccggcgatcctcacgccgcaacaggcgcgcgcggccaac
tcccacgtgctgccgccaatgaagctcgcgcgtggcgacgccggttcgaagatcgcgttg
gccgcgcatcgcgagaccggcgaaatgctactgggcggtcaggaacagttctacctggaa
ggtcagatttcgtacgccgtgccgaaggacgacgatggcatgcacgtgtggtgctcgacg
cagcatccgtctgaaatgcagcacatggtcgcgcatatgctcaacgtcgcgtcgcacaac
gtgctggtcgaatgcaggaggatgggtgggggcttcggcggcaaggagtcgcaatcggga
ctgttcgcgtgctgcgcggcgctcgccgcatggaagctgctgtgccccgtgaaactgcgt
ccggatcgcgacgacgacatgatgatcaccggcaagcggcacgactttcactacacatac
gaagtcggctatgacgacaccggtctgatcgacggcgtgtccgtcgacatgacgtcgcgt
tgcggtttttcggccgatctttcaggtccggtgatgacccgcgcgctgtgccatttcgac
aatgcgtactggttgccgcatgtatctatcgacgggttctgcggcaagaccaacacgcag
tcgaacacggcgtttcgaggcttcggcggaccgcagggcgcgttcgcgatcgagtacatt
gtcgacaacatcgcgcgttcggtggggctcgattcgctcgatgtgcgccgccggaatttg
tacggcaagaccgagcaaaacgtgactccgtacggtcaggcggttgaagacaacgtgatt
cacgaactgctcgacgagctcgaagccaccagcaattaccgcgctcgtcgcgaggctgtg
cgcgaattcaacgcaaacaacgatgtgctgaaaaaggggctcgcgctgacgccggtgaag
ttcggcattgcgttcaacgtgactcactttaaccaggccggcgcgctggtgcacatttac
accgacggttcggtactcgtgaatcacggcggcacggagatggggcaggggctcaatacg
aaagttgcgcaggtcgtcgcgcacgagctcggcatccgtttcaaccgtgtccgcgtcacg
gcgaccgacacgagcaaagtggcgaacacatcggcgacggcggcgtcgaccggtagcgat
ttgaacggcaaggccgcgcaggacgccgcccggcaattgcgcgaacggctcgccgcgctg
gccgccgagcactatggcgcgggccaggtcgacgcgcgcgacgtgcgtttcgtcgacgac
cgcattgtggtgggcgacaaggcgatccccttcgacgaagtgatcatgcaggcgtatcgc
gcgcgggtgcagttatggtccgatggtttctacaagaccccaaagctctactgggaccag
gggaagatgcagggtcggcccttctcttactactcctatggcgcagcggtttccgaagtc
gtgatcgacacgctgaccggcgaaatgcgtgtgctgcgcgccgacgcattgcacgacgta
ggcgcgtcgcttaatccggccttggacgtagggcaggtcgaaggcggcttcatccaggga
atgggatggctgacgaccgaggaattgtggtggaacgcgggcggcaagctgatgacccat
gcgccatcaacttacaagatcccgaccgtcaatgattgcccgcccgtgttcgatgtccgg
ttgttcaagaaccgcaacgcggaggacagcatccaccggtcgaaggctgtcggcgaaccg
cccttgctgctgccgttttcggtgttcttcgcgatccgagatgcagtggcaagcgtcggc
aataacactgtgaatccgccgctgaatgcgcccgcgaccagcgaggaaatattgaaggca
gtgcgtgccgttcgcgctgcagtggttgcaactgctgccgctcattga
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