Bordetella holmesii ATCC 51541: D560_2428
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Entry
D560_2428 CDS
T03052
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D560_2428 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bho01007
]
D560_2428 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bho03016
]
D560_2428 (trpS)
Enzymes [BR:
bho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
D560_2428 (trpS)
Amino acid related enzymes [BR:
bho01007
]
Aminoacyl-tRNA synthetase
Class I (G)
D560_2428 (trpS)
Transfer RNA biogenesis [BR:
bho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D560_2428 (trpS)
Prokaryotic type
D560_2428 (trpS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF1508
Motif
Other DBs
NCBI-ProteinID:
AHV93731
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All DBs
Position
2272871..2274193
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AA seq
440 aa
AA seq
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MTIRVLTGITTTGTPHLGNYAGAIRPAVRASEQPGVDAFFFLADYHALIKCDDPARVARS
RLEIAATWLAAGLDPERVTFYRQSDIPETTELCWFLTCVTAKGLMNRAHAYKASVDQNEA
KGVEPDDGVTMGLFSYPVLMAADILLFNAHKVPVGRDQVQHLEMARDIAQRFNHLYKGDF
FVLPEVQVEEDVATLPGLDGRKMSKSYNNTIPLFEGGSKALRGAISRIVTDSLQPGQPKD
ADASHLFTLYRAFARPDEVAAFRRELETGMGWGDAKQMLGERLELDIAPMREKYNALMAN
PGRIEEILQAGASKARKLASPLMERLRDAVGLRTLVAAPTAGKGAAKKAVAKGARFVSFR
DDDGTFRFRLLGTDGQELLLSEGHANPKDAGVLMRRLQDEDVELTEHDGSVGVMLQGAVV
ARGQAGADTIRQALDSLRQE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcgcgttcttacgggtattaccaccaccggcactcctcacctgggcaattat
gctggcgccatccgtcctgcggtgcgtgccagcgaacagcctggcgtggacgcttttttc
tttctggctgactaccacgctctgatcaagtgcgatgatcctgcgcgagtggcgcggtct
cgcctggagatcgcagcaacctggctggctgccggactggaccctgagcgcgttacgttc
taccgtcaatccgacatcccggagaccaccgagttgtgttggtttctgacctgcgtgacg
gccaagggcctgatgaaccgcgcgcatgcctacaaggcttccgtggatcagaacgaggcc
aaaggcgtggagccagacgatggcgtgaccatgggcctgttttcttacccggtgctcatg
gccgccgatatcctgttgttcaatgcgcacaaagtgccggtgggacgcgaccaggtgcag
catctggagatggcccgtgacatcgcccagcgcttcaatcatctgtacaagggcgatttc
ttcgtgctgcccgaagtccaggtcgaagaggatgttgcgaccttgcctggtctggacggc
cgcaagatgtccaagagctacaacaacaccattcccctgttcgagggcggctccaaggcc
ctgcgcggcgccatttcacgcatcgtgaccgactcgttgcaacctggacagcccaaggac
gccgacgcgtcgcatctgtttacgctgtaccgcgccttcgcgcggcccgatgaggtggcg
gcattccggcgcgagctcgaaaccggcatgggttggggcgacgccaagcagatgttgggc
gagcggctcgagctcgatatcgccccgatgcgcgagaagtacaacgcactgatggccaac
cctggccgcatcgaagagatactgcaggcaggcgcgagcaaggcgcgcaagcttgccagc
ccgctgatggagcgtctgcgtgacgccgtcggcctgcgcacgctggtcgccgcaccaacg
gctggcaagggcgcagccaagaaggcggtggccaagggcgcccgctttgtcagctttcgc
gacgacgacggtactttccgttttcgtctgttgggcaccgatggccaggaactgctgctg
tccgaaggccatgccaaccccaaggacgccggtgtgctgatgcgccggttgcaggacgag
gatgtcgagttgaccgagcatgatggcagtgtcggtgtcatgctgcagggcgctgtggtg
gcgcggggccaggccggggccgacacaatccggcaagcgctcgatagcctgcggcaagag
taa
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