Agrobacterium vaccinii: HRR99_12485
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Entry
HRR99_12485 CDS
T08171
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq00330
Arginine and proline metabolism
avq00480
Glutathione metabolism
avq01100
Metabolic pathways
avq01110
Biosynthesis of secondary metabolites
avq04148
Efferocytosis
Module
avq_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HRR99_12485
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HRR99_12485
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HRR99_12485
Enzymes [BR:
avq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HRR99_12485
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
ACT_9
Motif
Other DBs
NCBI-ProteinID:
UHS62281
LinkDB
All DBs
Position
circular:complement(2538393..2539526)
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AA seq
377 aa
AA seq
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MTTARILDFIKTRRPEGPCLVVDLDVVRDNFHAFRHALPNSSIYYAVKANPAPEILKLLA
GMGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEK
VARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQ
MMNLDAWDAALGDAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGHAIDTALR
KHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTERDGDEMEPCVLAGPTCDSADVMYEKNMYPLPVSLTIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKSYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcacgcatcctcgacttcatcaagacacgccgccccgaaggcccatgcctc
gtggtcgatcttgacgtcgtgcgcgataattttcacgcgttccggcatgctctgccaaac
agctcgatctattatgccgtcaaggcaaacccggcacctgaaattctcaagctgctggct
ggcatgggctccaacttcgattgcgcctccgtggctgaaatccagatggcgctcgatgcc
ggtgcgacctccgaccgcatctctttcggcaacaccatcaagaaggaacgcgatgttgcg
cgcgcccatgcgctcggcatcgatctcttcgccgtggacagccatgaggaagtcgaaaag
gttgcccgtgcagcccccggcgcccgcgtattctgccgcgttctgaccgatggtgaaggc
gccgaatggccgctgtcgcgcaagttcggttgcgtgccgcagatggctgtcgatgtactg
gtctatgcccatcagatgggtctggaatcctacggcgtgtctttccatgttggttcgcag
atgatgaacctcgacgcatgggatgctgctctcggcgatgcaaagcgcgtcttcgcgtcg
ctggccaagcagggcatccacctacagatggtcaacatgggcggtggcttcccaacgaag
tacctgcgcgacgtgcctgctgccgaagaatatggccatgccatcgacacggcgctgcgc
aagcacttcggcaaccagattccgaagaccatcatcgagccgggtcgcggcatggtcggt
aatgccggtgtcatcaaggcggaagtcgtgcttgtttcgcgcaagtccgacaacgacaac
caccgctgggtgttcctcgacatcggcaagttcggtggtctggccgaaacgatggacgaa
gccattcgttacccgatccgcaccgagcgtgacggcgacgagatggagccttgcgttctg
gcaggtccaacctgcgacagcgccgacgtgatgtacgagaagaacatgtatccgctgccg
gtctccctgactatcggcgacgaagttctgatcgaaggcacgggcgcctacacgaccacc
tattcggcggtcgccttcaacggtttcgagccgctgaagtcctatgtgatctga
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