KEGG   Agrobacterium vaccinii: HRR99_12485
Entry
HRR99_12485       CDS       T08171                                 
Name
(GenBank) type III PLP-dependent enzyme
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
avq  Agrobacterium vaccinii
Pathway
avq00330  Arginine and proline metabolism
avq00480  Glutathione metabolism
avq01100  Metabolic pathways
avq01110  Biosynthesis of secondary metabolites
avq04148  Efferocytosis
Module
avq_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:avq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    HRR99_12485
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    HRR99_12485
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    HRR99_12485
Enzymes [BR:avq01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     HRR99_12485
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N ACT_9
Other DBs
NCBI-ProteinID: UHS62281
LinkDB
Position
circular:complement(2538393..2539526)
AA seq 377 aa
MTTARILDFIKTRRPEGPCLVVDLDVVRDNFHAFRHALPNSSIYYAVKANPAPEILKLLA
GMGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEK
VARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQ
MMNLDAWDAALGDAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGHAIDTALR
KHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTERDGDEMEPCVLAGPTCDSADVMYEKNMYPLPVSLTIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKSYVI
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgacgactgcacgcatcctcgacttcatcaagacacgccgccccgaaggcccatgcctc
gtggtcgatcttgacgtcgtgcgcgataattttcacgcgttccggcatgctctgccaaac
agctcgatctattatgccgtcaaggcaaacccggcacctgaaattctcaagctgctggct
ggcatgggctccaacttcgattgcgcctccgtggctgaaatccagatggcgctcgatgcc
ggtgcgacctccgaccgcatctctttcggcaacaccatcaagaaggaacgcgatgttgcg
cgcgcccatgcgctcggcatcgatctcttcgccgtggacagccatgaggaagtcgaaaag
gttgcccgtgcagcccccggcgcccgcgtattctgccgcgttctgaccgatggtgaaggc
gccgaatggccgctgtcgcgcaagttcggttgcgtgccgcagatggctgtcgatgtactg
gtctatgcccatcagatgggtctggaatcctacggcgtgtctttccatgttggttcgcag
atgatgaacctcgacgcatgggatgctgctctcggcgatgcaaagcgcgtcttcgcgtcg
ctggccaagcagggcatccacctacagatggtcaacatgggcggtggcttcccaacgaag
tacctgcgcgacgtgcctgctgccgaagaatatggccatgccatcgacacggcgctgcgc
aagcacttcggcaaccagattccgaagaccatcatcgagccgggtcgcggcatggtcggt
aatgccggtgtcatcaaggcggaagtcgtgcttgtttcgcgcaagtccgacaacgacaac
caccgctgggtgttcctcgacatcggcaagttcggtggtctggccgaaacgatggacgaa
gccattcgttacccgatccgcaccgagcgtgacggcgacgagatggagccttgcgttctg
gcaggtccaacctgcgacagcgccgacgtgatgtacgagaagaacatgtatccgctgccg
gtctccctgactatcggcgacgaagttctgatcgaaggcacgggcgcctacacgaccacc
tattcggcggtcgccttcaacggtttcgagccgctgaagtcctatgtgatctga

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