Agrobacterium vitis VAR03-1: RvVAR031_23640
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Entry
RvVAR031_23640 CDS
T08810
Symbol
thyA
Name
(GenBank) thymidylate synthase
KO
K00560
thymidylate synthase [EC:
2.1.1.45
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00240
Pyrimidine metabolism
avf00670
One carbon pool by folate
avf01100
Metabolic pathways
avf01232
Nucleotide metabolism
avf04981
Folate transport and metabolism
Module
avf_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RvVAR031_23640 (thyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RvVAR031_23640 (thyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RvVAR031_23640 (thyA)
Enzymes [BR:
avf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.45 thymidylate synthase
RvVAR031_23640 (thyA)
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GFIT
Motif
Pfam:
Thymidylat_synt
Motif
Other DBs
NCBI-ProteinID:
BCH54754
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All DBs
Position
1:complement(2572033..2572902)
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AA seq
289 aa
AA seq
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MLFRLPLAEVSEVKLVSNDKRQAPTMKQYLDLLQHVMENGSDRGDRTGTGTRSVFGYQMR
FNLAEGFPVLTTKKLHLRSIIHELLWFLKGDTNIAYLKENGVSIWDEWADENGDLGPVYG
AQWRSWPKLGGGHIDQIANLVESIKTNPNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVA
DGKLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVTGLKPGDFIHTLGDAHLYANHFEQ
AGLQLTRQPKPLPVMQINPDVRDVFNFEFSDFSLENYSADPAIKAPIAV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcgacttccgttggcagaggtttcggaggtaaagcttgtttcaaacgacaaa
cggcaggcaccgaccatgaagcaatatctcgatctcctgcaacatgtgatggaaaacggc
tccgaccgtggcgatcgcaccggcaccggcacgcgctcggtctttgggtatcagatgcgg
tttaacctcgcggagggctttccggtcctgaccaccaagaagctgcatctgcgctcgatc
atccatgaactcctgtggtttttgaagggcgataccaatatcgcctatctgaaggaaaac
ggcgtttccatctgggacgaatgggccgatgaaaatggcgatctcggaccggtctatggc
gcgcagtggcgctcctggccaaagctcggcggtggccatatcgatcagattgccaatctc
gtcgagagcatcaagaccaaccccaattcccgtcgccatatcgtgtcggcctggaatccg
gccgaggtcgacgagatggcgctaccgccctgccattgcctgttccagttttatgtggcc
gatggcaagctctcgtgccagctctaccaacgctccgccgatattttcctaggcgtgccc
ttcaatatcgcctcctatgcgctgctgaccatgatggtggcgcaggtgacggggctgaaa
ccgggcgatttcattcatacgctgggggatgcacatctgtatgccaatcatttcgagcag
gccgggctgcaactgacccggcagccgaaacccttgccggtgatgcagatcaatccggac
gtcagggatgttttcaactttgaattcagcgatttcagcctggaaaactatagtgctgac
cctgccatcaaggcaccgattgccgtgtaa
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