KEGG   Arabidopsis lyrata (lyrate rockcress): 9300770
Entry
9300770           CDS       T01578                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00900  Terpenoid backbone biosynthesis
aly01100  Metabolic pathways
aly01110  Biosynthesis of secondary metabolites
Module
aly_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    9300770
Enzymes [BR:aly01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     9300770
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     9300770
SSDB
Motif
Pfam: GcpE Sgf11 zf-RING_7
Other DBs
NCBI-GeneID: 9300770
NCBI-ProteinID: XP_002864694
UniProt: D7MTV7
LinkDB
Position
Unknown
AA seq 741 aa
MATGVLPAPVSGVKVPDSKLGFGKSMNLARICDVRSLRSARRRVSVIRNSNQGSDVAELQ
PASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDIAGTV
DEVMRIADRGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPAVALRVAEC
FDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMY
VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGIKAAELQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISL
DQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDHMARLALKRLIDVSMGVI
APLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNMDATM
ILHDVPFTEDKVSRVHAARRLFEFLSENSVSFPVIHHINFPTGIHRDELVIHAGTYAGAL
LVDGLGDGVMLEAPDQDFEFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGSPGKIDLYVGKTVVKRGIAMTEAT
DALIGLIKEHGRWVDPPVADE
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcgactggagtattgccagctccggtttccggggtcaaggtcccggattcgaaactc
gggtttggtaaaagcatgaatcttgcgaggatttgtgatgttaggagtctaagatctgct
agaagaagagtttcggttatccggaattcaaaccaaggctctgatgtagccgagcttcaa
cctgcatcagaaggaagccctctcttagtgccaagacagaaatattgtgaatcattgcat
aagacggtgagaaggaagactcgtactgttatggttggaaatgtcgcccttggaagcgaa
catccgataaggattcaaactatgactacttcggatacaaaagatattgctggaactgtt
gatgaggttatgaggatagcggatagaggggctgatattgtgaggataactgttcaaggg
aagaaagaggcggatgcgtgcttcgaaataaaagataaacttgttcagcttaattacaat
ataccgctggttgcagatattcattttgcccctgctgtagccttacgagtcgctgaatgc
tttgacaagatccgtgtcaaccctggaaattttgcggacaggcgggcccagtttgagacg
atagaatatacagaagatgaatatcagaaagaactccagcatatcgagcaggtcttcact
cctttggttgagaaatgcaaaaagtacgggagagcaatgcgtatagggacaaatcatgga
agtctttctgaccgtatcatgagttattacggggattctccgcgaggaatggttgaatct
gcgtttgagtttgcaagaatatgtcggaaattagactatcacaactttgttttctcaatg
aaagcgagcaacccagtgatcatggtccaggcgtaccgtttacttgtggctgagatgtat
gttcatggatgggattatcctttgcatttgggagttactgaggcaggagaaggcgaagat
ggacggatgaaatctgcgattggaattgggacgcttcttcaggacgggctcggtgacaca
ataagagtatcactgacggagccaccagaagaggagatagatccctgcaggcgattggcc
aacctggggataaaagctgccgaacttcaacaaggcgttgcaccgtttgaagaaaagcat
aggcattactttgattttcagcgtcggacgggtgatctacctgtacaaaaagagggagaa
gaggttgattacagaaatgtccttcaccgtgatggttctgttctgatgtcgatttctctg
gatcaactaaaggcacctgaactcctctacagatcgctcgctacaaaacttgtcgtgggt
atgccattcaaggatctggcaactgttgattcaatcttattaagagagctaccgcctgta
gatgatcatatggctcgtttggctctaaaacggttgattgatgtcagtatgggagttata
gcaccgttatcggagcaactaacaaagccattacccaatgcaatggttcttgtcaacctc
aaggaactatctggtggcgcttacaagcttctccctgaaggtacacgcttggttgtctct
ctacgaggcgatgagccttacgaggagcttgaaatactcaaaaacatggatgctactatg
attctccatgatgtacccttcactgaagacaaagttagcagagtacatgcagctcggagg
ctattcgagttcctatccgagaattcagttagctttcctgttattcaccacataaatttc
ccaaccggaatccacagagacgaattagtgattcatgcagggacttatgctggagctctt
cttgtggatggactcggcgatggcgtaatgctcgaagcacctgaccaagattttgagttt
cttcggaatacttccttcaacttattacaaggctgcagaatgcgcaacactaagacggaa
tatgtatcgtgcccgtcttgtggaagaacgcttttcgacttgcaagaaatcagcgccgag
attcgagaaaagacttcacatttacctggcgtttcgatcgcaatcatgggatgcattgtg
aatggaccaggagaaatggcagatgctgatttcggatatgtaggtggttctcccggaaaa
atcgatctttatgtcggaaagacggtggtgaagcgtgggatagccatgacggaggcaaca
gatgctctgatcggtctgatcaaagaacatggtcgttgggtcgacccgcccgtggctgat
gagtag

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