Akkermansia biwaensis: Abiwalacus_18660
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Entry
Abiwalacus_18660 CDS
T08790
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Abiwalacus_18660 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abiw01007
]
Abiwalacus_18660 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abiw03016
]
Abiwalacus_18660 (trpS)
Enzymes [BR:
abiw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
Abiwalacus_18660 (trpS)
Amino acid related enzymes [BR:
abiw01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Abiwalacus_18660 (trpS)
Transfer RNA biogenesis [BR:
abiw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Abiwalacus_18660 (trpS)
Prokaryotic type
Abiwalacus_18660 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
BDL44292
LinkDB
All DBs
Position
complement(2319074..2320039)
Genome browser
AA seq
321 aa
AA seq
DB search
MRIITGLQPSGKLHIGNYFGAMEPAVRMQDRGESYYFLADYHAMSTVHDADTLRENCKNL
ATDFLAVGLDPEKCVFFRQSSVPEVNELAWILSTVCPVGLLERCHSYKDKIAKGFSPSNA
LFTYPVLMAADILMYDSDLVPVGKDQKQHLEVTRDLAGKMNEQFGEGTCKLPDALIAEST
AIVPGLDGQKMSKSYNNTLPIFGEEKATRKLIMRIPTDSTPVEEPKPTENSIILQLYKLF
ASAEGYEDMIRDFRNGGCGYGDFKKRLFDAYWEYFRAARKRRAELEASQDYVHQVLENGA
RKARGTASVVLDRVRRTVGLI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcattacaggacttcaacccagcggcaaactgcacatcggcaactacttcgga
gccatggaacctgccgtccgcatgcaggaccgcggagaatcctactactttctggcggat
taccacgccatgagcaccgtacacgacgcggacaccctgcgcgaaaactgcaaaaatctg
gcgacggacttcctggcggtggggctggacccggaaaaatgcgtcttcttccgccaatct
tccgtgccggaagtcaatgaactggcctggatactcagcaccgtatgccccgtaggactg
ctggagcgctgtcactcctacaaggacaagatcgccaaaggcttttcccccagcaacgcc
ctctttacctatcccgtgctgatggccgcggacatcctgatgtatgactccgacctggtg
cccgtaggcaaggaccagaaacagcatctggaagtcacccgcgacctggccggcaaaatg
aacgagcaattcggggaaggaacctgcaagctgccggacgctctcattgcggaaagcacc
gccatcgtccccgggctggacggtcagaaaatgagcaaaagctacaacaacacgctcccc
atcttcggggaggaaaaagccacccgcaagctcatcatgaggattcccacggactccacc
cctgtggaagaaccgaagccgacggaaaactccatcatcctccagctctacaagctcttc
gcctccgcggaaggctatgaagacatgatccgcgacttccggaacggaggctgcggctac
ggcgacttcaaaaaacgcctctttgacgcctactgggaatacttccgcgccgcgcggaaa
cgccgggcggagctggaagccagccaggactacgtgcaccaggtgctggaaaatggcgca
aggaaggcgcggggaacggcctccgtggtgctggaccgggtgcgccggaccgtgggcctg
atttga
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