KEGG   Shewanella sediminis: Ssed_0378
Entry
Ssed_0378         CDS       T00596                                 
Name
(GenBank) tRNA nucleotidyltransferase
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sse03016]
    Ssed_0378
Enzymes [BR:sse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     Ssed_0378
Transfer RNA biogenesis [BR:sse03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Ssed_0378
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ABV34991
UniProt: A8FQ68
Position
442841..443554
AA seq 237 aa
MRPSDRTPAQSRPVTITRQFTAHAEGSVLVEFGDTKVLCTASFEEGVPRFLKGKGQGWVT
AEYGMLPRSTHSRMNREAARGKQSGRTQEIQRLIGRSLRAAVDMKALGENTIVIDCDVIQ
ADGGTRTAAITGACVALVDSLNWARGKGILKTNPLKFLIAAVSVGIYKGEPICDLEYIED
SEAETDMNVVMTETGKMIEIQGTAEGEPFSHEELLSLLELAKHGIREIVDIQKAALS
NT seq 714 nt   +upstreamnt  +downstreamnt
atgcgccctagcgacagaaccccagctcaatcacgtccagtgacaattactcgtcagttt
acagctcatgctgaaggctctgttttagttgagttcggtgacactaaagtactttgtact
gccagcttcgaagagggagttccacgttttcttaagggaaaaggtcaaggttgggttact
gctgagtacggcatgctgccgcgttcgactcacagccgtatgaaccgtgaagctgctcgt
ggcaagcaatctggtcgtactcaggagatccagcgtcttatcggtcgctcactacgtgca
gccgttgacatgaaggctctgggtgaaaacaccatcgttatcgattgtgatgtaattcag
gccgatggtggcacgcgtaccgctgctatcactggcgcatgtgttgccttggttgattcg
cttaactgggctcgtggaaagggcattctgaaaacaaacccacttaagttccttatcgcc
gcagtcagtgttggtatctacaagggcgagccaatttgcgatctggagtatatcgaagac
agcgaagctgagaccgatatgaatgttgtgatgacagaaaccggcaagatgatcgagatc
cagggtactgctgaaggcgaaccatttagccatgaagagctactgagtttactggagttg
gctaagcacggtattcgtgaaattgtcgatatacagaaagcggcattgagctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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