KEGG T07652: JL100

Skermanella mucosa: JL100_029095

Entry

JL100_029095      CDS       T07652

Symbol

rph

Name

(GenBank) ribonuclease PH

K00989

ribonuclease PH [EC:2.7.7.56]

Organism

smuc Skermanella mucosa

Brite

KEGG Orthology (KO) [BR:smuc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smuc03016]
    JL100_029095 (rph)
Enzymes [BR:smuc01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     JL100_029095 (rph)
Transfer RNA biogenesis [BR:smuc03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    JL100_029095 (rph)

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C

Other DBs

NCBI-ProteinID:

UEM24156

Position

SKMUc:complement(6242985..6243704)

AA seq 239 aa
MRPSGRLPDALRQISLEPGFSKYAEGSCLVRFGDTHVLCTASVDERVPPFLRNTGLGWVT
AEYGMLPRSTGSRTDREAAKGRQSGRTQEIQRLIGRSLRAVTNRSGMGETQIKVDCDVIQ
ADGGTRTAAITGSYVALYLAFKHLVEIGKLKSIPMTDSVAGISAGIYNGTAVLDLDYAED
STAQADTNFVLTGSGGIVEVQGTAEEKPFSQNQFMELLALAQKGVAELTLLQKAALGLS

NT seq 720 nt +upstreamnt +downstreamnt
atgcgcccctccggccgccttcccgacgccctgcgtcagatcagcctggaaccgggcttc
tcgaaatatgccgagggttcctgcctcgtccggttcggcgacacccacgtgctgtgcacc
gccagcgtggacgagcgggtcccgccgttcctgcgcaacaccgggctgggctgggtcacc
gcggagtacggcatgctgccccgctccaccggcagccgcaccgaccgagaggcggccaag
ggccggcagtccggccgcacgcaggagatccagcgcctgatcggccgctcgctccgcgcg
gtcaccaaccggtccggcatgggcgagacccagatcaaggtcgactgcgacgtgatccag
gctgacggcggcacccgcacggcggcgatcaccggcagctacgtggcgctctacctcgcg
ttcaagcatctggtggagatcggcaagctgaagtcgatcccgatgaccgactcggtggcc
ggcatctcggccgggatctataacggcacggcggtgctggacctggactatgccgaggat
tcgaccgcccaggccgacaccaacttcgtgctgaccggcagcggcggcatcgtcgaggtg
cagggcaccgcggaggagaagccgttcagccagaaccagttcatggagctgctggcgctg
gcccagaagggcgtcgccgagctgaccctgcttcagaaggccgccctcggcctgtcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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